Pig1-131H19
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGGACTCAACCTTCCATCAAAGCTTGGAGACAGATACTCTGTTGACCAAGTTGTGCGGG CAGGACAGGCTCCTAAGGAGGCTGCAGGAGGAGATAGACCGGAGGCAGGAGGAGAAGGAG CAGCTAGAAGCAGCCCTGGAATTGACCAGACAGCAGCTGGGCCAAACAACCAGGGAGGCT GCAGCTCCTGGGAGGGCTTGGGGGCGCCAGCGTCTCCTGCAGGACCGACTGGTCAGTGTG CGGGCCACTATTTGTCATCTGACCCAGGAGCGAGAGCGGGTTTGGGACACGTACAGCGGC CTGGAGCAGGAGCTGAGCACCCTGAGAGAGACCCTTGAGTACTTGCTGCACCTCGGGTCC CCCCAGGACAGAGCATCTGCTCAGCAGCAACTGTGGATGGTGGAAGACACGCTGGCTGGT CTGGGGGGTCCCCAAANATCACCCTCCCACACTGAGCCTGACTCCCCATCCCCTGCACTC CA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGGACTCAACCTTCCATCAAAGCTTGGAGACAGATACTCTGTTGACCAAGTTGTGCGGG CAGGACAGGCTCCTAAGGAGGCTGCAGGAGGAGATAGACCGGAGGCAGGAGGAGAAGGAG CAGCTAGAAGCAGCCCTGGAATTGACCAGACAGCAGCTGGGCCAAACAACCAGGGAGGCT GCAGCTCCTGGGAGGGCTTGGGGGCGCCAGCGTCTCCTGCAGGACCGACTGGTCAGTGTG CGGGCCACTATTTGTCATCTGACCCAGGAGCGAGAGCGGGTTTGGGACACGTACAGCGGC CTGGAGCAGGAGCTGAGCACCCTGAGAGAGACCCTTGAGTACTTGCTGCACCTCGGGTCC CCCCAGGACAGAGCATCTGCTCAGCAGCAACTGTGGATGGTGGAAGACACGCTGGCTGGT CTGGGGGGTCCCCAAANATCACCCTCCCACACTGAGCCTGACTCCCCATCCCCTGCACTC CA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 111-230, + strand, RNAz p=0.876994 | |
| 111-230, - strand, RNAz p=0.876994 | |
| 111-268, + strand, RNAz p=0.983757 | |
| 111-268, - strand, RNAz p=0.983757 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 111-230, + strand, RNAz p=0.876994 | |
| 111-230, - strand, RNAz p=0.876994 | |
| 111-268, + strand, RNAz p=0.983757 | |
| 111-268, - strand, RNAz p=0.983757 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 111-268, gnl|bosTau2|chr18 (48057370-48057213) | |
| 111-268, gnl|canFam2|chr1 (110388668-110388325) | |
| 111-268, gnl|dasNov1|scaffold_174167 (1451-1144) | |
| 111-268, gnl|echTel1|scaffold_24027 (1696-2103) | |
| 111-268, gnl|hg17|chr19 (54048688-54049049) | |
| 111-268, gnl|Hg17|chr19 (54048907-54048750) | |
| 111-268, gnl|loxAfr1|scaffold_29393 (31677-32027) | |
| 111-268, gnl|mm7|chr7 (41716981-41716658) | |
| 111-268, gnl|Mm7|chr7 (41716777-41716933) | |
| 111-268, gnl|oryCun1|scaffold_173866 (44341-44011) | |
| 111-268, gnl|panTro1|chr20 (51469927-51470281) | |
| 111-268, gnl|rheMac2|chr19 (55134927-55135286) | |
| 111-268, gnl|rn3|chr1 (96090531-96090193) | |
| 358-482, gnl|bosTau2|chr18 (48054960-48054836) | |
| 358-482, gnl|canFam2|chr1 (110393005-110392853) | |
| 358-482, gnl|canFam2|chr1 (110393112-110392853) | |
| 358-482, gnl|dasNov1|scaffold_68594 (9163-9325) | |
| 358-482, gnl|dasNov1|scaffold_68594 (9075-9325) | |
| 358-482, gnl|hg17|chr19 (54042873-54043126) | |
| 358-482, gnl|Hg17|chr19 (54043118-54042994) | |
| 358-482, gnl|hg17|chr22 (29828506-29828660) | |
| 358-482, gnl|loxAfr1|scaffold_162078 (1110-941) | |
| 358-482, gnl|loxAfr1|scaffold_162078 (1214-941) | |
| 358-482, gnl|mm7|chr7 (41723888-41723662) | |
| 358-482, gnl|Mm7|chr7 (41723668-41723793) | |
| 358-482, gnl|oryCun1|scaffold_173866 (47813-47656) | |
| 358-482, gnl|oryCun1|scaffold_173866 (47940-47656) | |
| 358-482, gnl|panTro1|chr20 (51464103-51464356) | |
| 358-482, gnl|panTro1|chr23 (29928565-29928719) | |
| 358-482, gnl|rn3|chr1 (96096320-96096171) | |
| 358-482, gnl|rn3|chr1 (96096404-96096171) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-268, gnl|bosTau2|chr18 (48057370-48057213) | |
| 111-268, gnl|canFam2|chr1 (110388668-110388325) | |
| 111-268, gnl|dasNov1|scaffold_174167 (1451-1144) | |
| 111-268, gnl|echTel1|scaffold_24027 (1696-2103) | |
| 111-268, gnl|hg17|chr19 (54048688-54049049) | |
| 111-268, gnl|Hg17|chr19 (54048907-54048750) | |
| 111-268, gnl|loxAfr1|scaffold_29393 (31677-32027) | |
| 111-268, gnl|mm7|chr7 (41716981-41716658) | |
| 111-268, gnl|Mm7|chr7 (41716777-41716933) | |
| 111-268, gnl|oryCun1|scaffold_173866 (44341-44011) | |
| 111-268, gnl|panTro1|chr20 (51469927-51470281) | |
| 111-268, gnl|rheMac2|chr19 (55134927-55135286) | |
| 111-268, gnl|rn3|chr1 (96090531-96090193) | |
| 358-482, gnl|bosTau2|chr18 (48054960-48054836) | |
| 358-482, gnl|canFam2|chr1 (110393005-110392853) | |
| 358-482, gnl|canFam2|chr1 (110393112-110392853) | |
| 358-482, gnl|dasNov1|scaffold_68594 (9163-9325) | |
| 358-482, gnl|dasNov1|scaffold_68594 (9075-9325) | |
| 358-482, gnl|hg17|chr19 (54042873-54043126) | |
| 358-482, gnl|Hg17|chr19 (54043118-54042994) | |
| 358-482, gnl|hg17|chr22 (29828506-29828660) | |
| 358-482, gnl|loxAfr1|scaffold_162078 (1110-941) | |
| 358-482, gnl|loxAfr1|scaffold_162078 (1214-941) | |
| 358-482, gnl|mm7|chr7 (41723888-41723662) | |
| 358-482, gnl|Mm7|chr7 (41723668-41723793) | |
| 358-482, gnl|oryCun1|scaffold_173866 (47813-47656) | |
| 358-482, gnl|oryCun1|scaffold_173866 (47940-47656) | |
| 358-482, gnl|panTro1|chr20 (51464103-51464356) | |
| 358-482, gnl|panTro1|chr23 (29928565-29928719) | |
| 358-482, gnl|rn3|chr1 (96096320-96096171) | |
| 358-482, gnl|rn3|chr1 (96096404-96096171) |