Pig1-131M23
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAAAAGCGTCAGGAGGAGGCGCGTCTCCTTGAGGCTGAAGCCACAGCTGCCCCCTTGA GCAATGGGAAGGACCCGCTCCTGCTTCCCCTGGCCTCCCAGGGGACCTTAGGCCCCCCAA AAGACCCTGCAGAGCCCGACTGGGTCACTCAGTTTGTGCAGAAGAAAGAAGAGAGGGACC TGGTGGACCGCCTGAAGGAGGAGCAGGTCAGGAGGAGGAAGCGAGAAGAGCGCCTACAGC AGATCCGCCACAATGCACAGCTCAAGTATGCAGCCAAGCGTATGAGACAGGAAGATGAGG AAACCGAGCGTCTCCTCGACCTCAGCAGGGAGATGCTGGCGGCGGGCTCAGAGCCTGAGC AGCTGGCCTCAGAGGAGGAGGAGCTGGTCCTCGCCGAGTACGAGAGTGACGAGGAGAAAA GAAAGGCTAGTGGGTGAACAAAAAAAAGATCTGAGAAGACTTTTTTTCTGTGCGTGTTTT TTCCTCTCAGAGCAGATGAGGACGAGGATGACCTGGAGGAGGAGCACGTGACTAAGAGAA TGTTGGGGGCATGACCACCTCTTTGAGCCCCGCTCTCGCGGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAAAAGCGTCAGGAGGAGGCGCGTCTCCTTGAGGCTGAAGCCACAGCTGCCCCCTTGA GCAATGGGAAGGACCCGCTCCTGCTTCCCCTGGCCTCCCAGGGGACCTTAGGCCCCCCAA AAGACCCTGCAGAGCCCGACTGGGTCACTCAGTTTGTGCAGAAGAAAGAAGAGAGGGACC TGGTGGACCGCCTGAAGGAGGAGCAGGTCAGGAGGAGGAAGCGAGAAGAGCGCCTACAGC AGATCCGCCACAATGCACAGCTCAAGTATGCAGCCAAGCGTATGAGACAGGAAGATGAGG AAACCGAGCGTCTCCTCGACCTCAGCAGGGAGATGCTGGCGGCGGGCTCAGAGCCTGAGC AGCTGGCCTCAGAGGAGGAGGAGCTGGTCCTCGCCGAGTACGAGAGTGACGAGGAGAAAA GAAAGGCTAGTGGGTGAACAAAAAAAAGATCTGAGAAGACTTTTTTTCTGTGCGTGTTTT TTCCTCTCAGAGCAGATGAGGACGAGGATGACCTGGAGGAGGAGCACGTGACTAAGAGAA TGTTGGGGGCATGACCACCTCTTTGAGCCCCGCTCTCGCGGGCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 3-107, + strand, RNAz p=0.934158 | |
| 284-393, - strand, RNAz p=0.994022 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-107, + strand, RNAz p=0.934158 | |
| 284-393, - strand, RNAz p=0.994022 |
| Aligned organism(s): 63 entry(ies) | More info |
| Aligned organism(s): 63 entry(ies) | Help | Less info |
| 3-198, gnl|bosTau2|chr5 (64953696-64953888) | |
| 3-198, gnl|canFam2|chr27 (45110508-45110808) | |
| 3-198, gnl|canFam2|chr27 (45110808-45110508) | |
| 3-198, gnl|canFam2|chr27 (45110508-45110781) | |
| 3-198, gnl|danRer3|chr18 (2336188-2336420) | |
| 3-198, gnl|danRer3|chr18 (2336420-2336188) | |
| 3-198, gnl|danRer3|chr18 (2336188-2336420) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5577-5283) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5283-5577) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5577-5310) | |
| 3-198, gnl|echTel1|scaffold_268951 (7101-7402) | |
| 3-198, gnl|echTel1|scaffold_268951 (7402-7101) | |
| 3-198, gnl|echTel1|scaffold_268951 (7101-7374) | |
| 3-198, gnl|fr1|chrUn (21654197-21654438) | |
| 3-198, gnl|fr1|chrUn (21654438-21654197) | |
| 3-198, gnl|fr1|chrUn (21654197-21654438) | |
| 3-198, gnl|galGal2|chr1 (56583045-56583309) | |
| 3-198, gnl|galGal2|chr1 (56583309-56583045) | |
| 3-198, gnl|galGal2|chr1 (56583045-56583292) | |
| 3-198, gnl|hg17|chr12 (9337505-9337805) | |
| 3-198, gnl|hg17|chr12 (9481844-9482144) | |
| 3-198, gnl|hg17|chr12 (31127994-31128267) | |
| 3-198, gnl|Hg17|chr12 (9337582-9337774) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5205-5506) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5506-5205) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5205-5478) | |
| 3-198, gnl|mm7|chr17 (64347367-64347665) | |
| 3-198, gnl|mm7|chr17 (64347665-64347367) | |
| 3-198, gnl|mm7|chr17 (64347367-64347639) | |
| 3-198, gnl|Mm7|chr17 (64347446-64347635) | |
| 3-198, gnl|monDom2|scaffold_31 (23589189-23589480) | |
| 3-198, gnl|monDom2|scaffold_31 (23589480-23589189) | |
| 3-198, gnl|monDom2|scaffold_31 (23589189-23589454) | |
| 3-198, gnl|panTro1|chr10 (9880973-9881279) | |
| 3-198, gnl|panTro1|chrUn_random (57598791-57598490) | |
| 3-198, gnl|panTro1|chrUn_random (57598490-57598764) | |
| 3-198, gnl|rheMac2|chr11 (9608395-9608695) | |
| 3-198, gnl|rheMac2|chr11 (9608695-9608395) | |
| 3-198, gnl|rheMac2|chr11 (9608395-9608668) | |
| 3-198, gnl|rn3|chr9 (105216538-105216833) | |
| 3-198, gnl|rn3|chr9 (105216833-105216538) | |
| 3-198, gnl|rn3|chr9 (105216538-105216807) | |
| 3-198, gnl|tetNig1|chr13 (3210475-3210251) | |
| 3-198, gnl|tetNig1|chr13 (3210251-3210475) | |
| 3-198, gnl|tetNig1|chr13 (3210475-3210251) | |
| 284-435, gnl|bosTau2|chr5 (64954897-64955048) | |
| 284-435, gnl|canFam2|chr27 (45111667-45111841) | |
| 284-435, gnl|danRer3|chr18 (2339798-2339945) | |
| 284-435, gnl|dasNov1|scaffold_104196 (4362-4198) | |
| 284-435, gnl|echTel1|scaffold_268951 (8379-8544) | |
| 284-435, gnl|fr1|chrUn (21654711-21654857) | |
| 284-435, gnl|galGal2|chr1 (56586687-56586862) | |
| 284-435, gnl|hg17|chr12 (9338668-9338844) | |
| 284-435, gnl|Hg17|chr12 (9338679-9338839) | |
| 284-435, gnl|loxAfr1|scaffold_41133 (6371-6538) | |
| 284-435, gnl|mm7|chr17 (64348202-64348373) | |
| 284-435, gnl|Mm7|chr17 (64348211-64348368) | |
| 284-435, gnl|monDom2|scaffold_31 (23590659-23590822) | |
| 284-435, gnl|panTro1|chr10 (9882361-9882532) | |
| 284-435, gnl|rheMac2|chr11 (9609555-9609731) | |
| 284-435, gnl|rn3|chr9 (105217673-105217844) | |
| 284-435, gnl|tetNig1|chr13 (3210039-3209891) | |
| 284-435, gnl|xenTro1|scaffold_1073 (13441-13606) |
| Aligned organism(s): 63 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-198, gnl|bosTau2|chr5 (64953696-64953888) | |
| 3-198, gnl|canFam2|chr27 (45110508-45110808) | |
| 3-198, gnl|canFam2|chr27 (45110808-45110508) | |
| 3-198, gnl|canFam2|chr27 (45110508-45110781) | |
| 3-198, gnl|danRer3|chr18 (2336188-2336420) | |
| 3-198, gnl|danRer3|chr18 (2336420-2336188) | |
| 3-198, gnl|danRer3|chr18 (2336188-2336420) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5577-5283) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5283-5577) | |
| 3-198, gnl|dasNov1|scaffold_104196 (5577-5310) | |
| 3-198, gnl|echTel1|scaffold_268951 (7101-7402) | |
| 3-198, gnl|echTel1|scaffold_268951 (7402-7101) | |
| 3-198, gnl|echTel1|scaffold_268951 (7101-7374) | |
| 3-198, gnl|fr1|chrUn (21654197-21654438) | |
| 3-198, gnl|fr1|chrUn (21654438-21654197) | |
| 3-198, gnl|fr1|chrUn (21654197-21654438) | |
| 3-198, gnl|galGal2|chr1 (56583045-56583309) | |
| 3-198, gnl|galGal2|chr1 (56583309-56583045) | |
| 3-198, gnl|galGal2|chr1 (56583045-56583292) | |
| 3-198, gnl|hg17|chr12 (9337505-9337805) | |
| 3-198, gnl|hg17|chr12 (9481844-9482144) | |
| 3-198, gnl|hg17|chr12 (31127994-31128267) | |
| 3-198, gnl|Hg17|chr12 (9337582-9337774) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5205-5506) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5506-5205) | |
| 3-198, gnl|loxAfr1|scaffold_41133 (5205-5478) | |
| 3-198, gnl|mm7|chr17 (64347367-64347665) | |
| 3-198, gnl|mm7|chr17 (64347665-64347367) | |
| 3-198, gnl|mm7|chr17 (64347367-64347639) | |
| 3-198, gnl|Mm7|chr17 (64347446-64347635) | |
| 3-198, gnl|monDom2|scaffold_31 (23589189-23589480) | |
| 3-198, gnl|monDom2|scaffold_31 (23589480-23589189) | |
| 3-198, gnl|monDom2|scaffold_31 (23589189-23589454) | |
| 3-198, gnl|panTro1|chr10 (9880973-9881279) | |
| 3-198, gnl|panTro1|chrUn_random (57598791-57598490) | |
| 3-198, gnl|panTro1|chrUn_random (57598490-57598764) | |
| 3-198, gnl|rheMac2|chr11 (9608395-9608695) | |
| 3-198, gnl|rheMac2|chr11 (9608695-9608395) | |
| 3-198, gnl|rheMac2|chr11 (9608395-9608668) | |
| 3-198, gnl|rn3|chr9 (105216538-105216833) | |
| 3-198, gnl|rn3|chr9 (105216833-105216538) | |
| 3-198, gnl|rn3|chr9 (105216538-105216807) | |
| 3-198, gnl|tetNig1|chr13 (3210475-3210251) | |
| 3-198, gnl|tetNig1|chr13 (3210251-3210475) | |
| 3-198, gnl|tetNig1|chr13 (3210475-3210251) | |
| 284-435, gnl|bosTau2|chr5 (64954897-64955048) | |
| 284-435, gnl|canFam2|chr27 (45111667-45111841) | |
| 284-435, gnl|danRer3|chr18 (2339798-2339945) | |
| 284-435, gnl|dasNov1|scaffold_104196 (4362-4198) | |
| 284-435, gnl|echTel1|scaffold_268951 (8379-8544) | |
| 284-435, gnl|fr1|chrUn (21654711-21654857) | |
| 284-435, gnl|galGal2|chr1 (56586687-56586862) | |
| 284-435, gnl|hg17|chr12 (9338668-9338844) | |
| 284-435, gnl|Hg17|chr12 (9338679-9338839) | |
| 284-435, gnl|loxAfr1|scaffold_41133 (6371-6538) | |
| 284-435, gnl|mm7|chr17 (64348202-64348373) | |
| 284-435, gnl|Mm7|chr17 (64348211-64348368) | |
| 284-435, gnl|monDom2|scaffold_31 (23590659-23590822) | |
| 284-435, gnl|panTro1|chr10 (9882361-9882532) | |
| 284-435, gnl|rheMac2|chr11 (9609555-9609731) | |
| 284-435, gnl|rn3|chr9 (105217673-105217844) | |
| 284-435, gnl|tetNig1|chr13 (3210039-3209891) | |
| 284-435, gnl|xenTro1|scaffold_1073 (13441-13606) |