Pig1-135C04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTCAGGGTTACTTCCCTGTTCTGTTAATTAAACTTTGGAACATTGAAACAGGCTAGGA GAAGTGATTGGATAGAAAATGGTATTCTATTCATTTATCTCCCAGCCTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTCAGGGTTACTTCCCTGTTCTGTTAATTAAACTTTGGAACATTGAAACAGGCTAGGA GAAGTGATTGGATAGAAAATGGTATTCTATTCATTTATCTCCCAGCCTAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 2-110, - strand, RNAz p=0.997997 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-110, - strand, RNAz p=0.997997 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 9-94, - strand, RNAmicro p=0.980646 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 2-110, gnl|bosTau2|chr16 (11354802-11354910) | |
| 2-110, gnl|canFam2|chr38 (17976692-17976828) | |
| 2-110, gnl|canFam2|chr38 (17976693-17976825) | |
| 2-110, gnl|dasNov1|scaffold_10054 (7762-7618) | |
| 2-110, gnl|dasNov1|scaffold_92352 (5897-6030) | |
| 2-110, gnl|echTel1|scaffold_213425 (1496-1646) | |
| 2-110, gnl|echTel1|scaffold_307005 (1338-1202) | |
| 2-110, gnl|hg17|chr1 (216762282-216762427) | |
| 2-110, gnl|Hg17|chr1 (216762394-216762287) | |
| 2-110, gnl|hg17|chr2 (27776561-27776688) | |
| 2-110, gnl|loxAfr1|scaffold_641 (109304-109457) | |
| 2-110, gnl|loxAfr1|scaffold_641 (109303-109444) | |
| 2-110, gnl|mm7|chr1 (184768624-184768471) | |
| 2-110, gnl|Mm7|chr1 (184768505-184768613) | |
| 2-110, gnl|mm7|chr4 (46509100-46508976) | |
| 2-110, gnl|oryCun1|scaffold_205499 (199445-199297) | |
| 2-110, gnl|oryCun1|scaffold_210654 (39786-39660) | |
| 2-110, gnl|panTro1|chr12 (28717553-28717682) | |
| 2-110, gnl|panTro1|chr1_random (44522084-44522229) | |
| 2-110, gnl|rheMac2|chr1 (150162190-150162045) | |
| 2-110, gnl|rheMac2|chr13 (27621619-27621748) | |
| 2-110, gnl|rn3|chr13 (101443106-101442953) | |
| 2-110, gnl|rn3|chr13 (101443100-101442969) | |
| 2-110, gnl|xenTro1|scaffold_1952 (50037-50131) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-110, gnl|bosTau2|chr16 (11354802-11354910) | |
| 2-110, gnl|canFam2|chr38 (17976692-17976828) | |
| 2-110, gnl|canFam2|chr38 (17976693-17976825) | |
| 2-110, gnl|dasNov1|scaffold_10054 (7762-7618) | |
| 2-110, gnl|dasNov1|scaffold_92352 (5897-6030) | |
| 2-110, gnl|echTel1|scaffold_213425 (1496-1646) | |
| 2-110, gnl|echTel1|scaffold_307005 (1338-1202) | |
| 2-110, gnl|hg17|chr1 (216762282-216762427) | |
| 2-110, gnl|Hg17|chr1 (216762394-216762287) | |
| 2-110, gnl|hg17|chr2 (27776561-27776688) | |
| 2-110, gnl|loxAfr1|scaffold_641 (109304-109457) | |
| 2-110, gnl|loxAfr1|scaffold_641 (109303-109444) | |
| 2-110, gnl|mm7|chr1 (184768624-184768471) | |
| 2-110, gnl|Mm7|chr1 (184768505-184768613) | |
| 2-110, gnl|mm7|chr4 (46509100-46508976) | |
| 2-110, gnl|oryCun1|scaffold_205499 (199445-199297) | |
| 2-110, gnl|oryCun1|scaffold_210654 (39786-39660) | |
| 2-110, gnl|panTro1|chr12 (28717553-28717682) | |
| 2-110, gnl|panTro1|chr1_random (44522084-44522229) | |
| 2-110, gnl|rheMac2|chr1 (150162190-150162045) | |
| 2-110, gnl|rheMac2|chr13 (27621619-27621748) | |
| 2-110, gnl|rn3|chr13 (101443106-101442953) | |
| 2-110, gnl|rn3|chr13 (101443100-101442969) | |
| 2-110, gnl|xenTro1|scaffold_1952 (50037-50131) |