Non-Coding RNA Search

Pig1-14H19

Sequence:


               
               GGGCAGGGCCAGGACCTGGGCTCACACCATCTGGTCCTAGAGGTCAAGGCCCCTAGCACA
TGGGTGTCCTGTTcccatgtttcaggtgaggaaactgaggcccagagaggagaggttgct
tgcccaaggtcacacagctggaaggcggcagcagctgaattcacacccggacttctctga
ctccaaagcctgtgcCATTGACCTCAGCTCTGTCCCTGAGCTTGGATTTGAGGCTCGGCA
CTAGGGGAGCCCTGAGCAGACAGCACAGTTAGTTCAGCAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCAGGGCCAGGACCTGGGCTCACACCATCTGGTCCTAGAGGTCAAGGCCCCTAGCACA
TGGGTGTCCTGTTcccatgtttcaggtgaggaaactgaggcccagagaggagaggttgct
tgcccaaggtcacacagctggaaggcggcagcagctgaattcacacccggacttctctga
ctccaaagcctgtgcCATTGACCTCAGCTCTGTCCCTGAGCTTGGATTTGAGGCTCGGCA
CTAGGGGAGCCCTGAGCAGACAGCACAGTTAGTTCAGCAGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               119-231, - strand, RNAz p=0.940746

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               119-231, - strand, RNAz p=0.940746

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               154-253, - strand, RNAmicro p=0.978118

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               154-253, - strand, RNAmicro p=0.978118

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-282, gnl|bosTau2|chr18 (45849049-45848770)
               

               
               2-282, gnl|Hg17|chr19 (46589349-46588741)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-282, gnl|bosTau2|chr18 (45849049-45848770)
               

               
               2-282, gnl|Hg17|chr19 (46589349-46588741)

	2-282, gnl\|bosTau2\|chr18 (45849049-45848770)
	2-282, gnl\|Hg17\|chr19 (46589349-46588741)