Pig1-19D20
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATTTAATCACGGCACACCACACTGAAGTTCTTCCTACTGCACAGAAACTGGCAGATGAG ATTCTGTCCTCCAACTCCGAAATCAACCAAGTAAACGGTGCCCCTGACCCCACAGCTGGG GCCAGCATTGATGATGAGAACTGCTGGCATTTGGATGAAGAGCAAGTGAAAGAACAAGTG AAGCTCTTTCTCTCCCAAGGTGGTCACTATGGCTCTGGAAAGCAGCTCAATTCAATGTTT GCCAAGGTTCGAGAGATGCTGCGGATGAGAGATTCCAATGGAGCCAGGATGCTGACGCTA ATAACTGAGCAGTTTATGGCCGACCCACGACTCACACTCTGGAGGCAGCAAGGAACAAGC ATGACAGATAAGTGCAGGCAGCTCTGGGATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATTTAATCACGGCACACCACACTGAAGTTCTTCCTACTGCACAGAAACTGGCAGATGAG ATTCTGTCCTCCAACTCCGAAATCAACCAAGTAAACGGTGCCCCTGACCCCACAGCTGGG GCCAGCATTGATGATGAGAACTGCTGGCATTTGGATGAAGAGCAAGTGAAAGAACAAGTG AAGCTCTTTCTCTCCCAAGGTGGTCACTATGGCTCTGGAAAGCAGCTCAATTCAATGTTT GCCAAGGTTCGAGAGATGCTGCGGATGAGAGATTCCAATGGAGCCAGGATGCTGACGCTA ATAACTGAGCAGTTTATGGCCGACCCACGACTCACACTCTGGAGGCAGCAAGGAACAAGC ATGACAGATAAGTGCAGGCAGCTCTGGGATGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 97-248, + strand, RNAz p=0.865066 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 97-248, + strand, RNAz p=0.865066 |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 97-248, gnl|bosTau2|chr3 (68380597-68380446) | |
| 97-248, gnl|canFam2|chr15 (18255305-18255145) | |
| 97-248, gnl|canFam2|chr15 (18255296-18255152) | |
| 97-248, gnl|danRer3|chr2 (19033875-19033718) | |
| 97-248, gnl|danRer3|chr2 (19033866-19033723) | |
| 97-248, gnl|dasNov1|scaffold_107935 (3524-3684) | |
| 97-248, gnl|dasNov1|scaffold_107935 (3533-3677) | |
| 97-248, gnl|echTel1|scaffold_213229 (5960-5800) | |
| 97-248, gnl|echTel1|scaffold_213229 (5951-5807) | |
| 97-248, gnl|fr1|chrUn (22264647-22264804) | |
| 97-248, gnl|fr1|chrUn (35914006-35914149) | |
| 97-248, gnl|galGal2|chr8 (21210015-21210173) | |
| 97-248, gnl|galGal2|chr8 (21210022-21210154) | |
| 97-248, gnl|hg17|chr1 (45194858-45195018) | |
| 97-248, gnl|Hg17|chr1 (45195013-45194862) | |
| 97-248, gnl|hg17|chr4 (130418189-130418333) | |
| 97-248, gnl|mm7|chr4 (116335273-116335113) | |
| 97-248, gnl|mm7|chr4 (116335264-116335120) | |
| 97-248, gnl|Mm7|chr4 (116335116-116335267) | |
| 97-248, gnl|monDom2|scaffold_159 (1017071-1016828) | |
| 97-248, gnl|monDom2|scaffold_27 (25546881-25546723) | |
| 97-248, gnl|oryCun1|scaffold_200377 (402475-402631) | |
| 97-248, gnl|oryCun1|scaffold_200377 (402499-402623) | |
| 97-248, gnl|panTro1|chr1_random (65477174-65477014) | |
| 97-248, gnl|panTro1|chr3 (147351169-147351312) | |
| 97-248, gnl|rheMac2|chr1 (47987774-47987934) | |
| 97-248, gnl|rheMac2|chr5 (121456054-121456198) | |
| 97-248, gnl|rn3|chr5 (137271600-137271442) | |
| 97-248, gnl|rn3|chr5 (137271593-137271449) | |
| 97-248, gnl|tetNig1|chrUn_random (16207925-16208084) | |
| 97-248, gnl|tetNig1|chrUn_random (16207933-16208076) | |
| 97-248, gnl|xenTro1|scaffold_1 (7496488-7496648) | |
| 97-248, gnl|xenTro1|scaffold_1 (7496497-7496641) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-248, gnl|bosTau2|chr3 (68380597-68380446) | |
| 97-248, gnl|canFam2|chr15 (18255305-18255145) | |
| 97-248, gnl|canFam2|chr15 (18255296-18255152) | |
| 97-248, gnl|danRer3|chr2 (19033875-19033718) | |
| 97-248, gnl|danRer3|chr2 (19033866-19033723) | |
| 97-248, gnl|dasNov1|scaffold_107935 (3524-3684) | |
| 97-248, gnl|dasNov1|scaffold_107935 (3533-3677) | |
| 97-248, gnl|echTel1|scaffold_213229 (5960-5800) | |
| 97-248, gnl|echTel1|scaffold_213229 (5951-5807) | |
| 97-248, gnl|fr1|chrUn (22264647-22264804) | |
| 97-248, gnl|fr1|chrUn (35914006-35914149) | |
| 97-248, gnl|galGal2|chr8 (21210015-21210173) | |
| 97-248, gnl|galGal2|chr8 (21210022-21210154) | |
| 97-248, gnl|hg17|chr1 (45194858-45195018) | |
| 97-248, gnl|Hg17|chr1 (45195013-45194862) | |
| 97-248, gnl|hg17|chr4 (130418189-130418333) | |
| 97-248, gnl|mm7|chr4 (116335273-116335113) | |
| 97-248, gnl|mm7|chr4 (116335264-116335120) | |
| 97-248, gnl|Mm7|chr4 (116335116-116335267) | |
| 97-248, gnl|monDom2|scaffold_159 (1017071-1016828) | |
| 97-248, gnl|monDom2|scaffold_27 (25546881-25546723) | |
| 97-248, gnl|oryCun1|scaffold_200377 (402475-402631) | |
| 97-248, gnl|oryCun1|scaffold_200377 (402499-402623) | |
| 97-248, gnl|panTro1|chr1_random (65477174-65477014) | |
| 97-248, gnl|panTro1|chr3 (147351169-147351312) | |
| 97-248, gnl|rheMac2|chr1 (47987774-47987934) | |
| 97-248, gnl|rheMac2|chr5 (121456054-121456198) | |
| 97-248, gnl|rn3|chr5 (137271600-137271442) | |
| 97-248, gnl|rn3|chr5 (137271593-137271449) | |
| 97-248, gnl|tetNig1|chrUn_random (16207925-16208084) | |
| 97-248, gnl|tetNig1|chrUn_random (16207933-16208076) | |
| 97-248, gnl|xenTro1|scaffold_1 (7496488-7496648) | |
| 97-248, gnl|xenTro1|scaffold_1 (7496497-7496641) |