Non-Coding RNA Search

Pig1-1K11

Sequence:


               
               TTGCAATAGAACTACAAACTCACGAGGAACTGCAGAGAATGTCCAGGTGGGTGTTTTTCA
TATGTATTGGAAAGGGCACATGCCTTTACCTGGATTGTCTCCTAGGGGAACAAGACACAT
ATCTGACAATATAAATGGGATAATTCATGTCTTGGCCCAAATTGGCACCATTAGCAGGCT
TTCTGCTTTGGTGTCATTTCATGTAAGCCCACTGTGTGGTCTTGGAAGAAACAGCCCAGT
TCATCATTTAAACTGTTTCCTACATTGAGAAATTAAGAATGCAAAACAAAAGGAGTTGAG
CCTGAGTCCTGGCTGCAATGATTTCCAGCATCACTCTTCCAGTTCCAGGTCTCATGCAAA
ATTGTTAGGGCAATTTGGGACTCTGTAATCACTTGTTTCTAACAGAGACTATATTTTTAA
CCTCGTAACTCCAGTTGTGGCATGAAATCATCACTTAACCAAAACCTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCAATAGAACTACAAACTCACGAGGAACTGCAGAGAATGTCCAGGTGGGTGTTTTTCA
TATGTATTGGAAAGGGCACATGCCTTTACCTGGATTGTCTCCTAGGGGAACAAGACACAT
ATCTGACAATATAAATGGGATAATTCATGTCTTGGCCCAAATTGGCACCATTAGCAGGCT
TTCTGCTTTGGTGTCATTTCATGTAAGCCCACTGTGTGGTCTTGGAAGAAACAGCCCAGT
TCATCATTTAAACTGTTTCCTACATTGAGAAATTAAGAATGCAAAACAAAAGGAGTTGAG
CCTGAGTCCTGGCTGCAATGATTTCCAGCATCACTCTTCCAGTTCCAGGTCTCATGCAAA
ATTGTTAGGGCAATTTGGGACTCTGTAATCACTTGTTTCTAACAGAGACTATATTTTTAA
CCTCGTAACTCCAGTTGTGGCATGAAATCATCACTTAACCAAAACCTTTTA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               159-271, + strand, RNAz p=0.746407

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               159-271, + strand, RNAz p=0.746407

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-469, gnl|bosTau2|chr5 (34541906-34542391)
               

               
               5-469, gnl|Hg17|chr12 (56668311-56668763)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-469, gnl|bosTau2|chr5 (34541906-34542391)
               

               
               5-469, gnl|Hg17|chr12 (56668311-56668763)

	5-469, gnl\|bosTau2\|chr5 (34541906-34542391)
	5-469, gnl\|Hg17\|chr12 (56668311-56668763)