Pig1-22O21
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTCAGTGTTGGCATTAAATGTGATGCCCGAGTGTTAAGTGAGGATGAGGAAGATGTGGA TTTTGACATTATTCACAACGCCAATGACACATTTACAGTAAAGTATGTGCCTCCTGCTGC TGGGCGATACACAATCAAAGTCCTCTTTGCCTCTCAGGAAATCCCCGCCAGCCCTTTCCG AGTCAGAGTTGACCCTTCCCACGATGCCAGCAAAGTGAAGGCAGAAGGTCCAGGACTCAG CAAATCAGGTGTGGAAAACGGGAAACCGACCCACTTTACTGTCTACACCAAAGGGGCTGG AAAAGCCCCACTCAACGTGCAGTTCAGCAGCCCCCTTCCTGGCGACGCGGTGAAGGATTT GGATGTCATCGATAATTATGACTACTCCCACACCGTCAAATACACTCCCACCCAGCAGGG C |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTCAGTGTTGGCATTAAATGTGATGCCCGAGTGTTAAGTGAGGATGAGGAAGATGTGGA TTTTGACATTATTCACAACGCCAATGACACATTTACAGTAAAGTATGTGCCTCCTGCTGC TGGGCGATACACAATCAAAGTCCTCTTTGCCTCTCAGGAAATCCCCGCCAGCCCTTTCCG AGTCAGAGTTGACCCTTCCCACGATGCCAGCAAAGTGAAGGCAGAAGGTCCAGGACTCAG CAAATCAGGTGTGGAAAACGGGAAACCGACCCACTTTACTGTCTACACCAAAGGGGCTGG AAAAGCCCCACTCAACGTGCAGTTCAGCAGCCCCCTTCCTGGCGACGCGGTGAAGGATTT GGATGTCATCGATAATTATGACTACTCCCACACCGTCAAATACACTCCCACCCAGCAGGG C |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 246-364, - strand, RNAz p=0.900621 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 246-364, - strand, RNAz p=0.900621 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 271-362, + strand, RNAmicro p=0.984907 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-158, gnl|bosTau2|chr22 (31797456-31797612) | |
| 2-158, gnl|canFam2|chr20 (35445090-35444912) | |
| 2-158, gnl|danRer3|chrUn (92110069-92109890) | |
| 2-158, gnl|dasNov1|scaffold_3292 (15566-15745) | |
| 2-158, gnl|echTel1|scaffold_314211 (33595-33416) | |
| 2-158, gnl|fr1|chrUn (221837412-221837591) | |
| 2-158, gnl|galGal2|chr12 (8958002-8958180) | |
| 2-158, gnl|hg17|chr3 (58070769-58070948) | |
| 2-158, gnl|Hg17|chr3 (58070782-58070938) | |
| 2-158, gnl|loxAfr1|scaffold_282 (114461-114640) | |
| 2-158, gnl|mm7|chr14 (5704592-5704769) | |
| 2-158, gnl|Mm7|chr14 (5704605-5704761) | |
| 2-158, gnl|monDom2|scaffold_5 (2975011-2975190) | |
| 2-158, gnl|oryCun1|scaffold_201170 (85651-85830) | |
| 2-158, gnl|panTro1|chr2 (59822312-59822491) | |
| 2-158, gnl|rheMac2|chr2 (78282234-78282055) | |
| 2-158, gnl|rn3|chr15 (19004511-19004335) | |
| 2-158, gnl|tetNig1|chrUn_random (11653149-11653324) | |
| 2-158, gnl|xenTro1|scaffold_80 (2175955-2176133) | |
| 246-419, gnl|bosTau2|chr22 (31799108-31799281) | |
| 246-419, gnl|canFam2|chr20 (35443549-35443357) | |
| 246-419, gnl|danRer3|chrUn (92109650-92109458) | |
| 246-419, gnl|dasNov1|scaffold_1198 (44132-43954) | |
| 246-419, gnl|echTel1|scaffold_314211 (31957-31765) | |
| 246-419, gnl|fr1|chrUn (221837852-221838022) | |
| 246-419, gnl|galGal2|chr12 (8959037-8959233) | |
| 246-419, gnl|hg17|chr3 (58072899-58073091) | |
| 246-419, gnl|Hg17|chr3 (58072913-58073086) | |
| 246-419, gnl|loxAfr1|scaffold_282 (116161-116360) | |
| 246-419, gnl|mm7|chr14 (5706442-5706634) | |
| 246-419, gnl|Mm7|chr14 (5706456-5706629) | |
| 246-419, gnl|monDom2|scaffold_5 (2977780-2977972) | |
| 246-419, gnl|oryCun1|scaffold_201170 (86072-86261) | |
| 246-419, gnl|panTro1|chr2 (59824450-59824642) | |
| 246-419, gnl|rheMac2|chr2 (78280129-78279936) | |
| 246-419, gnl|rn3|chr15 (19003180-19002991) | |
| 246-419, gnl|tetNig1|chrUn_random (11653609-11653772) | |
| 246-419, gnl|xenTro1|scaffold_80 (2177009-2177194) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-158, gnl|bosTau2|chr22 (31797456-31797612) | |
| 2-158, gnl|canFam2|chr20 (35445090-35444912) | |
| 2-158, gnl|danRer3|chrUn (92110069-92109890) | |
| 2-158, gnl|dasNov1|scaffold_3292 (15566-15745) | |
| 2-158, gnl|echTel1|scaffold_314211 (33595-33416) | |
| 2-158, gnl|fr1|chrUn (221837412-221837591) | |
| 2-158, gnl|galGal2|chr12 (8958002-8958180) | |
| 2-158, gnl|hg17|chr3 (58070769-58070948) | |
| 2-158, gnl|Hg17|chr3 (58070782-58070938) | |
| 2-158, gnl|loxAfr1|scaffold_282 (114461-114640) | |
| 2-158, gnl|mm7|chr14 (5704592-5704769) | |
| 2-158, gnl|Mm7|chr14 (5704605-5704761) | |
| 2-158, gnl|monDom2|scaffold_5 (2975011-2975190) | |
| 2-158, gnl|oryCun1|scaffold_201170 (85651-85830) | |
| 2-158, gnl|panTro1|chr2 (59822312-59822491) | |
| 2-158, gnl|rheMac2|chr2 (78282234-78282055) | |
| 2-158, gnl|rn3|chr15 (19004511-19004335) | |
| 2-158, gnl|tetNig1|chrUn_random (11653149-11653324) | |
| 2-158, gnl|xenTro1|scaffold_80 (2175955-2176133) | |
| 246-419, gnl|bosTau2|chr22 (31799108-31799281) | |
| 246-419, gnl|canFam2|chr20 (35443549-35443357) | |
| 246-419, gnl|danRer3|chrUn (92109650-92109458) | |
| 246-419, gnl|dasNov1|scaffold_1198 (44132-43954) | |
| 246-419, gnl|echTel1|scaffold_314211 (31957-31765) | |
| 246-419, gnl|fr1|chrUn (221837852-221838022) | |
| 246-419, gnl|galGal2|chr12 (8959037-8959233) | |
| 246-419, gnl|hg17|chr3 (58072899-58073091) | |
| 246-419, gnl|Hg17|chr3 (58072913-58073086) | |
| 246-419, gnl|loxAfr1|scaffold_282 (116161-116360) | |
| 246-419, gnl|mm7|chr14 (5706442-5706634) | |
| 246-419, gnl|Mm7|chr14 (5706456-5706629) | |
| 246-419, gnl|monDom2|scaffold_5 (2977780-2977972) | |
| 246-419, gnl|oryCun1|scaffold_201170 (86072-86261) | |
| 246-419, gnl|panTro1|chr2 (59824450-59824642) | |
| 246-419, gnl|rheMac2|chr2 (78280129-78279936) | |
| 246-419, gnl|rn3|chr15 (19003180-19002991) | |
| 246-419, gnl|tetNig1|chrUn_random (11653609-11653772) | |
| 246-419, gnl|xenTro1|scaffold_80 (2177009-2177194) |