Non-Coding RNA Search

Pig1-24L19

Sequence:


               
               GCAATACTAGAGGCTCCACGACCGTCCTCCAAGAGGAGGAGAGGCTACTCACCCTCCTTC
GATGATGAAGTATCGGAGCTTGTCATTGCTGTCTCGGGAGGGGGTGGCATAGCACTTGTT
CAGCGTCAGGATCAGATGTGTTGAGTCGGCTCCGACCACAAAGACCCCGACGTATAGCAC
GTCCCGGGTGGTCAGCACTACCTCACCCTGGCGGTAGGGGTGCTTGTAGGAGGCGTTTTT
GTACAGTGCCATCTTGGTGGTGAAGCTGCCTTCTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAATACTAGAGGCTCCACGACCGTCCTCCAAGAGGAGGAGAGGCTACTCACCCTCCTTC
GATGATGAAGTATCGGAGCTTGTCATTGCTGTCTCGGGAGGGGGTGGCATAGCACTTGTT
CAGCGTCAGGATCAGATGTGTTGAGTCGGCTCCGACCACAAAGACCCCGACGTATAGCAC
GTCCCGGGTGGTCAGCACTACCTCACCCTGGCGGTAGGGGTGCTTGTAGGAGGCGTTTTT
GTACAGTGCCATCTTGGTGGTGAAGCTGCCTTCTTGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               147-266, - strand, RNAz p=0.583629

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               147-266, - strand, RNAz p=0.583629

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               40-276, gnl|bosTau2|chr15 (16445137-16444901)
               

               
               40-276, gnl|Hg17|chr11 (120544857-120544621)
               

               
               40-276, gnl|Mm7|chr9 (42271451-42271699)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-276, gnl|bosTau2|chr15 (16445137-16444901)
               

               
               40-276, gnl|Hg17|chr11 (120544857-120544621)
               

               
               40-276, gnl|Mm7|chr9 (42271451-42271699)

	40-276, gnl\|bosTau2\|chr15 (16445137-16444901)
	40-276, gnl\|Hg17\|chr11 (120544857-120544621)
	40-276, gnl\|Mm7\|chr9 (42271451-42271699)