Non-Coding RNA Search

Pig1-28G14

Sequence:


               
               GCCCACGCGTCCGGGGGCGCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTTCG
ACCTGGACCGGGGCGAGGTGGGTGCGGTGCCCTCGCCCGTGGAGTTCATGGGCTACCTCT
ACTTCGTGGGCACCATCGTCTTTGGCCCCTGGATATCCTTCCACAGCTACCTACAGGCCG
TCCAAGGCCGCCCGCTGAGCCGCCGATGGCTGCAGAAGGTGGCCCGGAGCCTGGCGCTGG
CCCTGCTGTGCCTTGTGCTGTCCACCTGTGTGGGCCCCTACCTCTTCCCATACTTCATCC
CCCTGGACGGTGACCGCCTTCTTCGCAAGTGGCTGCGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGGGGGCGCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTTCG
ACCTGGACCGGGGCGAGGTGGGTGCGGTGCCCTCGCCCGTGGAGTTCATGGGCTACCTCT
ACTTCGTGGGCACCATCGTCTTTGGCCCCTGGATATCCTTCCACAGCTACCTACAGGCCG
TCCAAGGCCGCCCGCTGAGCCGCCGATGGCTGCAGAAGGTGGCCCGGAGCCTGGCGCTGG
CCCTGCTGTGCCTTGTGCTGTCCACCTGTGTGGGCCCCTACCTCTTCCCATACTTCATCC
CCCTGGACGGTGACCGCCTTCTTCGCAAGTGGCTGCGAGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               95-197, - strand, RNAz p=0.981324

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               95-197, - strand, RNAz p=0.981324

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-340, gnl|bosTau2|chr18 (28276742-28277067)
               

               
               14-340, gnl|Hg17|chrX (48126967-48128893)
               

               
               14-340, gnl|Mm7|chrX (6636942-6634708)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-340, gnl|bosTau2|chr18 (28276742-28277067)
               

               
               14-340, gnl|Hg17|chrX (48126967-48128893)
               

               
               14-340, gnl|Mm7|chrX (6636942-6634708)

	14-340, gnl\|bosTau2\|chr18 (28276742-28277067)
	14-340, gnl\|Hg17\|chrX (48126967-48128893)
	14-340, gnl\|Mm7\|chrX (6636942-6634708)