Pig1-28H10
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAGCTCAGTGGCACTGCAGTTTTTATTTGCCATTCTTGCATCCCTGGTCTTGCAGTGA TTTACCTCATGATGTCATGATTTGCTAAGAGAAAACATTTTCTTTTCATTCTGAATCCCA CATAGCCTAGCACTAGTCTTCTTTTTTTCTTTTTCCAGGCAGAAAATAAATACTTTCGAG GAAAAAGTTCCTGTCAAATAAGAAGCATCACAAGATCGAGTTACTTTCTGTGTACTAACT GGTGACATGGACAACTGCTCAGGATAAAGTGCCTCCCAAGGAAAATGTAGAGTGTTTGCT AAAGTCAGAGTTGAGATCTGGGATATAACTAACGAAAGCAATGGTGCTGTTAAGTAAATC ATTAGTTTCCAATACTACTTGTCATTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAGCTCAGTGGCACTGCAGTTTTTATTTGCCATTCTTGCATCCCTGGTCTTGCAGTGA TTTACCTCATGATGTCATGATTTGCTAAGAGAAAACATTTTCTTTTCATTCTGAATCCCA CATAGCCTAGCACTAGTCTTCTTTTTTTCTTTTTCCAGGCAGAAAATAAATACTTTCGAG GAAAAAGTTCCTGTCAAATAAGAAGCATCACAAGATCGAGTTACTTTCTGTGTACTAACT GGTGACATGGACAACTGCTCAGGATAAAGTGCCTCCCAAGGAAAATGTAGAGTGTTTGCT AAAGTCAGAGTTGAGATCTGGGATATAACTAACGAAAGCAATGGTGCTGTTAAGTAAATC ATTAGTTTCCAATACTACTTGTCATTAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 196-304, + strand, RNAz p=0.609911 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 196-304, + strand, RNAz p=0.609911 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 216-271, + strand, RNAmicro p=0.938037 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_024408, + |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 2-162, gnl|bosTau2|chr3 (18494524-18494682) | |
| 2-162, gnl|canFam2|chr17 (59935265-59935407) | |
| 2-162, gnl|dasNov1|scaffold_1268 (99139-98996) | |
| 2-162, gnl|echTel1|scaffold_321115 (5580-5726) | |
| 2-162, gnl|hg17|chr1 (120166599-120166737) | |
| 2-162, gnl|Hg17|chr1 (120166727-120166598) | |
| 2-162, gnl|loxAfr1|scaffold_5776 (109705-109560) | |
| 2-162, gnl|mm7|chr3 (98021716-98021572) | |
| 2-162, gnl|Mm7|chr3 (98021583-98021728) | |
| 2-162, gnl|oryCun1|scaffold_195059 (18006-17878) | |
| 2-162, gnl|panTro1|chr1 (120035558-120035696) | |
| 2-162, gnl|rheMac2|chr1 (122832771-122832909) | |
| 2-162, gnl|rn3|chr2 (192952071-192951923) | |
| 196-388, gnl|bosTau2|chr3 (18495802-18495987) | |
| 196-388, gnl|canFam2|chr17 (59934993-59935218) | |
| 196-388, gnl|dasNov1|scaffold_1268 (99401-99184) | |
| 196-388, gnl|echTel1|scaffold_321115 (5336-5535) | |
| 196-388, gnl|hg17|chr1 (120166323-120166550) | |
| 196-388, gnl|Hg17|chr1 (120166531-120166336) | |
| 196-388, gnl|mm7|chr3 (98021966-98021763) | |
| 196-388, gnl|oryCun1|scaffold_195059 (18270-18049) | |
| 196-388, gnl|panTro1|chr1 (120035286-120035509) | |
| 196-388, gnl|rheMac2|chr1 (122832494-122832722) | |
| 196-388, gnl|rn3|chr2 (192952320-192952118) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-162, gnl|bosTau2|chr3 (18494524-18494682) | |
| 2-162, gnl|canFam2|chr17 (59935265-59935407) | |
| 2-162, gnl|dasNov1|scaffold_1268 (99139-98996) | |
| 2-162, gnl|echTel1|scaffold_321115 (5580-5726) | |
| 2-162, gnl|hg17|chr1 (120166599-120166737) | |
| 2-162, gnl|Hg17|chr1 (120166727-120166598) | |
| 2-162, gnl|loxAfr1|scaffold_5776 (109705-109560) | |
| 2-162, gnl|mm7|chr3 (98021716-98021572) | |
| 2-162, gnl|Mm7|chr3 (98021583-98021728) | |
| 2-162, gnl|oryCun1|scaffold_195059 (18006-17878) | |
| 2-162, gnl|panTro1|chr1 (120035558-120035696) | |
| 2-162, gnl|rheMac2|chr1 (122832771-122832909) | |
| 2-162, gnl|rn3|chr2 (192952071-192951923) | |
| 196-388, gnl|bosTau2|chr3 (18495802-18495987) | |
| 196-388, gnl|canFam2|chr17 (59934993-59935218) | |
| 196-388, gnl|dasNov1|scaffold_1268 (99401-99184) | |
| 196-388, gnl|echTel1|scaffold_321115 (5336-5535) | |
| 196-388, gnl|hg17|chr1 (120166323-120166550) | |
| 196-388, gnl|Hg17|chr1 (120166531-120166336) | |
| 196-388, gnl|mm7|chr3 (98021966-98021763) | |
| 196-388, gnl|oryCun1|scaffold_195059 (18270-18049) | |
| 196-388, gnl|panTro1|chr1 (120035286-120035509) | |
| 196-388, gnl|rheMac2|chr1 (122832494-122832722) | |
| 196-388, gnl|rn3|chr2 (192952320-192952118) |