Pig1-29A10
|
GGATTGACATCTGGATGGCGGTGTGCCTTCTGTTTGTGTTTGCAGCCTTACTGGAATATG
CGGCAGTGAACTTTGTCTCCAGGCAGCACAAGGAGTTCCTGCGACTCCGGAGAAGACAGA
AGAGGCAGAACAAGGAAGAAGATGTTACTCGTGAAAGTCGTTTTAATTTCAGTGGTTATG
GGATGGGTCACTGCCTCCAAGTGAAAGATGGAACAGCTGTCAAGGCCACACCTGCCAACC
AGCTCCCACAACCCCCCAAAGATGCAGACGCCATCAAGAAGAAGTTTGTGGACCGGGCAA
AAAGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGATTGACATCTGGATGGCGGTGTGCCTTCTGTTTGTGTTTGCAGCCTTACTGGAATATG
CGGCAGTGAACTTTGTCTCCAGGCAGCACAAGGAGTTCCTGCGACTCCGGAGAAGACAGA
AGAGGCAGAACAAGGAAGAAGATGTTACTCGTGAAAGTCGTTTTAATTTCAGTGGTTATG
GGATGGGTCACTGCCTCCAAGTGAAAGATGGAACAGCTGTCAAGGCCACACCTGCCAACC
AGCTCCCACAACCCCCCAAAGATGCAGACGCCATCAAGAAGAAGTTTGTGGACCGGGCAA
AAAGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-135, gnl|bosTau2|chrX (40647369-40647502) |
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2-135, gnl|canFam2|chrX (10954061-10954228) |
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2-135, gnl|danRer3|chr14 (64403848-64403694) |
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2-135, gnl|dasNov1|scaffold_32662 (15248-15081) |
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2-135, gnl|echTel1|scaffold_123099 (517-688) |
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2-135, gnl|fr1|chrUn (176570327-176570486) |
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2-135, gnl|galGal2|chr1 (115693068-115692909) |
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2-135, gnl|hg17|chrX (14468473-14468647) |
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2-135, gnl|Hg17|chrX (14468506-14468639) |
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2-135, gnl|loxAfr1|scaffold_122083 (374-206) |
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2-135, gnl|mm7|chrX (159958102-159957928) |
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2-135, gnl|Mm7|chrX (159958067-159957934) |
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2-135, gnl|monDom2|scaffold_25 (25873848-25873690) |
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2-135, gnl|oryCun1|scaffold_204295 (28920-28744) |
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2-135, gnl|panTro1|chrX (14920125-14920299) |
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2-135, gnl|rheMac2|chrX (12419560-12419742) |
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2-135, gnl|rn3|chrX (49979814-49979989) |
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2-135, gnl|tetNig1|chr2 (10275481-10275322) |
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2-135, gnl|xenTro1|scaffold_116 (2226501-2226679) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-135, gnl|bosTau2|chrX (40647369-40647502) |
|
2-135, gnl|canFam2|chrX (10954061-10954228) |
|
2-135, gnl|danRer3|chr14 (64403848-64403694) |
|
2-135, gnl|dasNov1|scaffold_32662 (15248-15081) |
|
2-135, gnl|echTel1|scaffold_123099 (517-688) |
|
2-135, gnl|fr1|chrUn (176570327-176570486) |
|
2-135, gnl|galGal2|chr1 (115693068-115692909) |
|
2-135, gnl|hg17|chrX (14468473-14468647) |
|
2-135, gnl|Hg17|chrX (14468506-14468639) |
|
2-135, gnl|loxAfr1|scaffold_122083 (374-206) |
|
2-135, gnl|mm7|chrX (159958102-159957928) |
|
2-135, gnl|Mm7|chrX (159958067-159957934) |
|
2-135, gnl|monDom2|scaffold_25 (25873848-25873690) |
|
2-135, gnl|oryCun1|scaffold_204295 (28920-28744) |
|
2-135, gnl|panTro1|chrX (14920125-14920299) |
|
2-135, gnl|rheMac2|chrX (12419560-12419742) |
|
2-135, gnl|rn3|chrX (49979814-49979989) |
|
2-135, gnl|tetNig1|chr2 (10275481-10275322) |
|
2-135, gnl|xenTro1|scaffold_116 (2226501-2226679) |
