Pig1-29E03
|
GAAGGATTGTTTCCTTCCCTCCCCTTGCCTCTCATCGCACCCCTCTTCTCCAGGGCACAA
ATCCCCATTGGGAGAGGGGCCTGTTGACATGGACACTCAGGGGCCCTAGCTGGAGCCAGG
AGCTGCAGATGGGGGCCCCTTCCCTGTTCTGGAAGCCAGCCAGGGACCTGTGGGCAATGC
AGCATGAGGCTTTGTACCCCTGCCCCCCATATCGCACCCACAGTGGCCTGCAGTTTGGGG
AACCAGTCCAGGGCTGAGATGGGGTAGCCCTTCCCCAAACA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAGGATTGTTTCCTTCCCTCCCCTTGCCTCTCATCGCACCCCTCTTCTCCAGGGCACAA
ATCCCCATTGGGAGAGGGGCCTGTTGACATGGACACTCAGGGGCCCTAGCTGGAGCCAGG
AGCTGCAGATGGGGGCCCCTTCCCTGTTCTGGAAGCCAGCCAGGGACCTGTGGGCAATGC
AGCATGAGGCTTTGTACCCCTGCCCCCCATATCGCACCCACAGTGGCCTGCAGTTTGGGG
AACCAGTCCAGGGCTGAGATGGGGTAGCCCTTCCCCAAACA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
82-177, + strand, RNAmicro p=0.965121 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
82-177, + strand, RNAmicro p=0.965121 |
|
10-279, gnl|bosTau2|chr19 (18185224-18184965) |
|
10-279, gnl|canFam2|chr9 (50090871-50091589) |
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10-279, gnl|dasNov1|scaffold_7324 (30610-31322) |
|
10-279, gnl|echTel1|scaffold_130942 (862-106) |
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10-279, gnl|hg17|chr17 (2570943-2571676) |
|
10-279, gnl|Hg17|chr17 (2571449-2571167) |
|
10-279, gnl|mm7|chr11 (74722978-74722343) |
|
10-279, gnl|Mm7|chr11 (74722515-74722784) |
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10-279, gnl|oryCun1|scaffold_206134 (8582-7941) |
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10-279, gnl|panTro1|chr19 (2764120-2764855) |
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10-279, gnl|rheMac2|chr16 (2529287-2530031) |
|
10-279, gnl|rn3|chr10 (61935725-61935101) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-279, gnl|bosTau2|chr19 (18185224-18184965) |
|
10-279, gnl|canFam2|chr9 (50090871-50091589) |
|
10-279, gnl|dasNov1|scaffold_7324 (30610-31322) |
|
10-279, gnl|echTel1|scaffold_130942 (862-106) |
|
10-279, gnl|hg17|chr17 (2570943-2571676) |
|
10-279, gnl|Hg17|chr17 (2571449-2571167) |
|
10-279, gnl|mm7|chr11 (74722978-74722343) |
|
10-279, gnl|Mm7|chr11 (74722515-74722784) |
|
10-279, gnl|oryCun1|scaffold_206134 (8582-7941) |
|
10-279, gnl|panTro1|chr19 (2764120-2764855) |
|
10-279, gnl|rheMac2|chr16 (2529287-2530031) |
|
10-279, gnl|rn3|chr10 (61935725-61935101) |
