Pig1-29H16
|
GGTCCATGAACATGTACGCCAGCGTCTTCTTCCTCACCTCCATGAGCGTGGCGCGCTACC
ACTCGGTGGCCTCGGCTCTTAAGAGTCACCGGACCCAAGGGCACGGCCGGGGTGACTGCT
GCGGCCGAAGCCTGGGGGACAGCTGCTGCTTCTCAGCCAAAGTTCTGTGTGTGTTGATCT
GGGCCGCGGCCACGCTGGCCTCGCTGCCCAACGCCATCTTCTTCACCACCATCAAGGTGA
TGGGCGAGGAGCTGTGCTTGGTGCGCTTCCCAGACAAGTTGCTGGGGCGCGACAGGCAGT
TCTGGCTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGTCCATGAACATGTACGCCAGCGTCTTCTTCCTCACCTCCATGAGCGTGGCGCGCTACC
ACTCGGTGGCCTCGGCTCTTAAGAGTCACCGGACCCAAGGGCACGGCCGGGGTGACTGCT
GCGGCCGAAGCCTGGGGGACAGCTGCTGCTTCTCAGCCAAAGTTCTGTGTGTGTTGATCT
GGGCCGCGGCCACGCTGGCCTCGCTGCCCAACGCCATCTTCTTCACCACCATCAAGGTGA
TGGGCGAGGAGCTGTGCTTGGTGCGCTTCCCAGACAAGTTGCTGGGGCGCGACAGGCAGT
TCTGGCTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-309, gnl|bosTau2|chr20 (26028795-26028488) |
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2-309, gnl|canFam2|chr4 (77069109-77068614) |
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2-309, gnl|danRer3|chrNA (46348964-46348517) |
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2-309, gnl|dasNov1|scaffold_24475 (7351-7843) |
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2-309, gnl|echTel1|scaffold_277743 (4609-5037) |
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2-309, gnl|fr1|chrUn (83968731-83969184) |
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2-309, gnl|galGal2|chrZ_random (9542414-9542873) |
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2-309, gnl|hg17|chr5 (33972845-33973337) |
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2-309, gnl|Hg17|chr5 (33973088-33973395) |
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2-309, gnl|loxAfr1|scaffold_3619 (19315-18794) |
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2-309, gnl|mm7|chr15 (11095333-11094841) |
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2-309, gnl|Mm7|chr15 (11095088-11094781) |
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2-309, gnl|monDom2|scaffold_20 (38721664-38721160) |
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2-309, gnl|oryCun1|scaffold_205660 (71615-71123) |
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2-309, gnl|panTro1|chr4 (99318807-99319299) |
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2-309, gnl|rheMac2|chr6 (34041664-34042156) |
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2-309, gnl|rn3|chr2 (60320179-60319687) |
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2-309, gnl|tetNig1|chr4 (3734418-3733965) |
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2-309, gnl|xenTro1|scaffold_820 (185635-186082) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-309, gnl|bosTau2|chr20 (26028795-26028488) |
|
2-309, gnl|canFam2|chr4 (77069109-77068614) |
|
2-309, gnl|danRer3|chrNA (46348964-46348517) |
|
2-309, gnl|dasNov1|scaffold_24475 (7351-7843) |
|
2-309, gnl|echTel1|scaffold_277743 (4609-5037) |
|
2-309, gnl|fr1|chrUn (83968731-83969184) |
|
2-309, gnl|galGal2|chrZ_random (9542414-9542873) |
|
2-309, gnl|hg17|chr5 (33972845-33973337) |
|
2-309, gnl|Hg17|chr5 (33973088-33973395) |
|
2-309, gnl|loxAfr1|scaffold_3619 (19315-18794) |
|
2-309, gnl|mm7|chr15 (11095333-11094841) |
|
2-309, gnl|Mm7|chr15 (11095088-11094781) |
|
2-309, gnl|monDom2|scaffold_20 (38721664-38721160) |
|
2-309, gnl|oryCun1|scaffold_205660 (71615-71123) |
|
2-309, gnl|panTro1|chr4 (99318807-99319299) |
|
2-309, gnl|rheMac2|chr6 (34041664-34042156) |
|
2-309, gnl|rn3|chr2 (60320179-60319687) |
|
2-309, gnl|tetNig1|chr4 (3734418-3733965) |
|
2-309, gnl|xenTro1|scaffold_820 (185635-186082) |
