Non-Coding RNA Search

Pig1-29O23

Sequence:


               
               GGTGAGCTAGGCCACCCTCTGTGGCCCTTCCCCACATTCCTGTGGTGCTACGTGACGCTG
CCGGGGCTGCTGGCCCTCCTCGCCCTCTGCCTGGTGCAGTTCTACCAGAGCACACACCTC
TACTACATCGCCTGGGACAGCAGTGCGGTGAGACTCCCCCACCCTGGCCTCCAGCCCCCA
CCCTGGGGACCCCTTGTCAGAACCCCTCTGCCAGGACCCTAAGTCTGGGCTCCTGGCCTC
CCTGGGGACCCTTTGACCGGCTCCCCAGGCCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGAGCTAGGCCACCCTCTGTGGCCCTTCCCCACATTCCTGTGGTGCTACGTGACGCTG
CCGGGGCTGCTGGCCCTCCTCGCCCTCTGCCTGGTGCAGTTCTACCAGAGCACACACCTC
TACTACATCGCCTGGGACAGCAGTGCGGTGAGACTCCCCCACCCTGGCCTCCAGCCCCCA
CCCTGGGGACCCCTTGTCAGAACCCCTCTGCCAGGACCCTAAGTCTGGGCTCCTGGCCTC
CCTGGGGACCCTTTGACCGGCTCCCCAGGCCCGG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

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               2-120, - strand, RNAz p=0.721253
               

               
               160-272, - strand, RNAz p=0.999182

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-120, - strand, RNAz p=0.721253
               

               
               160-272, - strand, RNAz p=0.999182

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-272, gnl|bosTau2|chr18 (48490252-48489982)
               

               
               2-272, gnl|Mm7|chr7 (41463440-41463725)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-272, gnl|bosTau2|chr18 (48490252-48489982)
               

               
               2-272, gnl|Mm7|chr7 (41463440-41463725)

	2-120, - strand, RNAz p=0.721253
	160-272, - strand, RNAz p=0.999182

	2-272, gnl\|bosTau2\|chr18 (48490252-48489982)
	2-272, gnl\|Mm7\|chr7 (41463440-41463725)