Pig1-30K23
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GCAGAGGAACAGTGTGTCTCCTGGCCTGCCCCAGCGGCCAGCCAGTGCAGGGGCCATGCT
GGGGGGAGACCTCAACAGTGCTAACGGAGCCTGCCCCAGCCCTGTAGGGAATGGCTACGT
CAGTGCTCGGGCTTCCCCTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT
CATCCCTGCCAAGTCTCCGCCCCCACCCACCCACAGCGCCCAGCTTGGAGCCCCCAGCCG
CAAGCCCGACCTGAGGGTCATCACTTCCCAGGGAGGAAAGGGGTTAATGCATCACTTGGT
GAGTGGGTATCTGGACCAAGGGGCAGGAGCCAGGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAGAGGAACAGTGTGTCTCCTGGCCTGCCCCAGCGGCCAGCCAGTGCAGGGGCCATGCT
GGGGGGAGACCTCAACAGTGCTAACGGAGCCTGCCCCAGCCCTGTAGGGAATGGCTACGT
CAGTGCTCGGGCTTCCCCTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT
CATCCCTGCCAAGTCTCCGCCCCCACCCACCCACAGCGCCCAGCTTGGAGCCCCCAGCCG
CAAGCCCGACCTGAGGGTCATCACTTCCCAGGGAGGAAAGGGGTTAATGCATCACTTGGT
GAGTGGGTATCTGGACCAAGGGGCAGGAGCCAGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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117-250, - strand, RNAmicro p=0.999092 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
117-250, - strand, RNAmicro p=0.999092 |
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97-330, gnl|bosTau2|chr3 (10805642-10805409) |
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97-330, gnl|canFam2|chr7 (44433143-44432981) |
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97-330, gnl|danRer3|chr16 (29981935-29981816) |
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97-330, gnl|dasNov1|scaffold_4075 (54110-53951) |
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97-330, gnl|echTel1|scaffold_270373 (7495-7652) |
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97-330, gnl|fr1|chrUn (278502094-278502207) |
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97-330, gnl|galGal2|chrUn (161450363-161450524) |
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97-330, gnl|hg17|chr1 (153259843-153260004) |
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97-330, gnl|Hg17|chr1 (153260078-153259846) |
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97-330, gnl|loxAfr1|scaffold_24634 (4802-4642) |
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97-330, gnl|mm7|chr3 (88275217-88275057) |
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97-330, gnl|Mm7|chr3 (88274981-88275212) |
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97-330, gnl|monDom2|scaffold_59 (1005776-1005616) |
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97-330, gnl|oryCun1|scaffold_170903 (11092-11245) |
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97-330, gnl|panTro1|chr1 (135222263-135222424) |
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97-330, gnl|rheMac2|chr1 (135085061-135085222) |
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97-330, gnl|rn3|chr2 (180190058-180189898) |
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97-330, gnl|tetNig1|chrUn_random (41347699-41347577) |
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97-330, gnl|xenTro1|scaffold_433 (221107-221244) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
97-330, gnl|bosTau2|chr3 (10805642-10805409) |
|
97-330, gnl|canFam2|chr7 (44433143-44432981) |
|
97-330, gnl|danRer3|chr16 (29981935-29981816) |
|
97-330, gnl|dasNov1|scaffold_4075 (54110-53951) |
|
97-330, gnl|echTel1|scaffold_270373 (7495-7652) |
|
97-330, gnl|fr1|chrUn (278502094-278502207) |
|
97-330, gnl|galGal2|chrUn (161450363-161450524) |
|
97-330, gnl|hg17|chr1 (153259843-153260004) |
|
97-330, gnl|Hg17|chr1 (153260078-153259846) |
|
97-330, gnl|loxAfr1|scaffold_24634 (4802-4642) |
|
97-330, gnl|mm7|chr3 (88275217-88275057) |
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97-330, gnl|Mm7|chr3 (88274981-88275212) |
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97-330, gnl|monDom2|scaffold_59 (1005776-1005616) |
|
97-330, gnl|oryCun1|scaffold_170903 (11092-11245) |
|
97-330, gnl|panTro1|chr1 (135222263-135222424) |
|
97-330, gnl|rheMac2|chr1 (135085061-135085222) |
|
97-330, gnl|rn3|chr2 (180190058-180189898) |
|
97-330, gnl|tetNig1|chrUn_random (41347699-41347577) |
|
97-330, gnl|xenTro1|scaffold_433 (221107-221244) |
