Pig1-34P19
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGATCAACCAGACTGAGGCCCAGACAGGGCAGCGCAGCCACCTTCCCTATGACGTCACAC CAGAGCAGGCCTTGAGCCACCCTGAGGTCCAGAGACGACTGGACATCTCGCTCCGCAGCC TCCTTGCTATGACCGATAAGTTCCTTGTAGCCATCATCTCATCAGTGGACCAAATTCCGT ATGGGATGCGCTATGTGGCCAAGGTCCTGAAGACAACTCTGGCAGAGAAGTTCCCTGACG CCACAGAGAGTGAGGTCTATAAGGTGGTAGGGAACCTCCTGTACTACCGCTTCCTGAACC CGGCTGTAGTGGCCCCTGATGCCTTCGACATTGTGGCCATGGCAGCAGGTGGCGCCCTGG CCACCCCGCAGCGCCACGCCCTGGGGGCTGTGGCTCAACTCCTGCAGCATGCTGCGGCGG GCAAGGCCTTCTCCGGGGAGAGCCAGCACCTGCGGGTCTTGAATGACTATCTGGAGGAGA CGCACCTCAAGTTCAGGAGGTTCATCTGCCGAGCCTGCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGATCAACCAGACTGAGGCCCAGACAGGGCAGCGCAGCCACCTTCCCTATGACGTCACAC CAGAGCAGGCCTTGAGCCACCCTGAGGTCCAGAGACGACTGGACATCTCGCTCCGCAGCC TCCTTGCTATGACCGATAAGTTCCTTGTAGCCATCATCTCATCAGTGGACCAAATTCCGT ATGGGATGCGCTATGTGGCCAAGGTCCTGAAGACAACTCTGGCAGAGAAGTTCCCTGACG CCACAGAGAGTGAGGTCTATAAGGTGGTAGGGAACCTCCTGTACTACCGCTTCCTGAACC CGGCTGTAGTGGCCCCTGATGCCTTCGACATTGTGGCCATGGCAGCAGGTGGCGCCCTGG CCACCCCGCAGCGCCACGCCCTGGGGGCTGTGGCTCAACTCCTGCAGCATGCTGCGGCGG GCAAGGCCTTCTCCGGGGAGAGCCAGCACCTGCGGGTCTTGAATGACTATCTGGAGGAGA CGCACCTCAAGTTCAGGAGGTTCATCTGCCGAGCCTGCCAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 82-183, - strand, RNAz p=0.977836 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 82-183, - strand, RNAz p=0.977836 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 35-183, gnl|bosTau2|chr3 (10865989-10865841) | |
| 35-183, gnl|canFam2|chr7 (44381581-44381351) | |
| 35-183, gnl|danRer3|chr15 (4494393-4494233) | |
| 35-183, gnl|dasNov1|scaffold_4075 (6451-6223) | |
| 35-183, gnl|echTel1|scaffold_294341 (65526-65376) | |
| 35-183, gnl|fr1|chrUn (24077082-24076895) | |
| 35-183, gnl|galGal2|chr10 (20881523-20881314) | |
| 35-183, gnl|hg17|chr1 (153320021-153320252) | |
| 35-183, gnl|Hg17|chr1 (153320189-153320041) | |
| 35-183, gnl|loxAfr1|scaffold_14597 (32550-32774) | |
| 35-183, gnl|mm7|chr3 (88223959-88223736) | |
| 35-183, gnl|Mm7|chr3 (88223793-88223941) | |
| 35-183, gnl|monDom2|scaffold_59 (895595-895373) | |
| 35-183, gnl|oryCun1|scaffold_210913 (444-606) | |
| 35-183, gnl|panTro1|chr1 (135282739-135282970) | |
| 35-183, gnl|rheMac2|chr1 (135146178-135146409) | |
| 35-183, gnl|rn3|chr2 (180137917-180137690) | |
| 35-183, gnl|tetNig1|chrUn_random (6791181-6790989) | |
| 35-183, gnl|xenTro1|scaffold_433 (374102-374255) | |
| 262-497, gnl|bosTau2|chr3 (10863901-10863666) | |
| 262-497, gnl|Hg17|chr1 (153317600-153317365) | |
| 262-497, gnl|Mm7|chr3 (88226397-88226632) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-183, gnl|bosTau2|chr3 (10865989-10865841) | |
| 35-183, gnl|canFam2|chr7 (44381581-44381351) | |
| 35-183, gnl|danRer3|chr15 (4494393-4494233) | |
| 35-183, gnl|dasNov1|scaffold_4075 (6451-6223) | |
| 35-183, gnl|echTel1|scaffold_294341 (65526-65376) | |
| 35-183, gnl|fr1|chrUn (24077082-24076895) | |
| 35-183, gnl|galGal2|chr10 (20881523-20881314) | |
| 35-183, gnl|hg17|chr1 (153320021-153320252) | |
| 35-183, gnl|Hg17|chr1 (153320189-153320041) | |
| 35-183, gnl|loxAfr1|scaffold_14597 (32550-32774) | |
| 35-183, gnl|mm7|chr3 (88223959-88223736) | |
| 35-183, gnl|Mm7|chr3 (88223793-88223941) | |
| 35-183, gnl|monDom2|scaffold_59 (895595-895373) | |
| 35-183, gnl|oryCun1|scaffold_210913 (444-606) | |
| 35-183, gnl|panTro1|chr1 (135282739-135282970) | |
| 35-183, gnl|rheMac2|chr1 (135146178-135146409) | |
| 35-183, gnl|rn3|chr2 (180137917-180137690) | |
| 35-183, gnl|tetNig1|chrUn_random (6791181-6790989) | |
| 35-183, gnl|xenTro1|scaffold_433 (374102-374255) | |
| 262-497, gnl|bosTau2|chr3 (10863901-10863666) | |
| 262-497, gnl|Hg17|chr1 (153317600-153317365) | |
| 262-497, gnl|Mm7|chr3 (88226397-88226632) |