Non-Coding RNA Search

Pig1-35I09

Sequence:


               
               GCAGACGGGCCTGCCGCGGCCCGAGGTGGTGCGCTGGTTCGGGGACAGCAGGTACGCCCT
GAAGAATGGCCAGCTCAAGTGGTACGAAGACTATAAGCGGGGCAACTTCCCCCCCGGGCT
GCTGGTCATCGCCCCAAACAACCGGGAGCTGCTGCAAGACTATTATGTGACCCACAAGAT
GCTGTACGAGGCGGACCTGCAGGGCCTCTGCGACAAGACCCAGATGAGCGCCCAGCAGGT
CAAGCAGTGGTTTGCTGAGAAGATGGGCGAGGAGACCCGGGCCGTGGCCGACACGGCCAG
TGAGAGCCAGGGTCCCGGCGCTGGCGACCCTGCGATGGTCCACAGAGGGATGGGCGACAC
CTATTTGGAGGTGTCCGAAAACAGTGAGTCGTGGGAGCCCGGTGCCCCTGAGGCCAGCTC
TGAACCCTTTGACACACCAAGTCCCCAAGCTGGACCTCAGCTGGAAACAGACTGAAGGGG
AGCCGATGGCCGTGAAGGACTGGCCAGTCTTGGAGGCTGCCTGCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGACGGGCCTGCCGCGGCCCGAGGTGGTGCGCTGGTTCGGGGACAGCAGGTACGCCCT
GAAGAATGGCCAGCTCAAGTGGTACGAAGACTATAAGCGGGGCAACTTCCCCCCCGGGCT
GCTGGTCATCGCCCCAAACAACCGGGAGCTGCTGCAAGACTATTATGTGACCCACAAGAT
GCTGTACGAGGCGGACCTGCAGGGCCTCTGCGACAAGACCCAGATGAGCGCCCAGCAGGT
CAAGCAGTGGTTTGCTGAGAAGATGGGCGAGGAGACCCGGGCCGTGGCCGACACGGCCAG
TGAGAGCCAGGGTCCCGGCGCTGGCGACCCTGCGATGGTCCACAGAGGGATGGGCGACAC
CTATTTGGAGGTGTCCGAAAACAGTGAGTCGTGGGAGCCCGGTGCCCCTGAGGCCAGCTC
TGAACCCTTTGACACACCAAGTCCCCAAGCTGGACCTCAGCTGGAAACAGACTGAAGGGG
AGCCGATGGCCGTGAAGGACTGGCCAGTCTTGGAGGCTGCCTGCCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28972199|dbj|BAC65553.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28972199|dbj|BAC65553.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               202-401, + strand, RNAz p=0.923506

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               202-401, + strand, RNAz p=0.923506

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-464, gnl|bosTau2|chr13 (51416378-51415916)
               

               
               2-464, gnl|Hg17|chr20 (39264573-39264111)
               

               
               2-464, gnl|Mm7|chr2 (160520753-160520291)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-464, gnl|bosTau2|chr13 (51416378-51415916)
               

               
               2-464, gnl|Hg17|chr20 (39264573-39264111)
               

               
               2-464, gnl|Mm7|chr2 (160520753-160520291)

	2-464, gnl\|bosTau2\|chr13 (51416378-51415916)
	2-464, gnl\|Hg17\|chr20 (39264573-39264111)
	2-464, gnl\|Mm7\|chr2 (160520753-160520291)