Non-Coding RNA Search

Pig1-36I10

Sequence:


               
               GCCCACGCGTCCGATTGCCAAAGATTCTGCCTACTGAAGACAGGGCGCTCAGGGAAAGGG
GGCCCTCCCAGACACTGCCGGCAGTGCAGCCCAGTGGCCCCATAAACATGGAAGAGACCA
GGCCGGAAGGGAGCTACTTCAGCAAGTACTCGGAGGCGGCTGAGTTAAGAAGCACAGCCT
CGCTCCTGGCCACTCAAGAGTCCGATGTGATGGTTGGGCCCTTCAAGCTGAGGTCCAGGA
AGCAGCGGACTTTGTCCATGATTGAAGAAGAGATCCGAGCCGCCCAGGAAAGGGAAGAGG
AGCTGAAGAGGCAGAGGCAAGTCTTGCAGAGTACCCCAAGCCCCAGGGCAAAGAATGCCC
CATCACTGCCCTCCCGAACACCAACACCGTGCTACAAAACTGCTCCAGGTCCTTGAGGCC
ACACGTGTTAATCGAAGAAAGAGCGCCTTGGCCTTGCGCTGGGAGGCGGGGATCTATGCC
AACCAAGAAGAAGAGGACAATGAATAATCAACTTCTTTCCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGATTGCCAAAGATTCTGCCTACTGAAGACAGGGCGCTCAGGGAAAGGG
GGCCCTCCCAGACACTGCCGGCAGTGCAGCCCAGTGGCCCCATAAACATGGAAGAGACCA
GGCCGGAAGGGAGCTACTTCAGCAAGTACTCGGAGGCGGCTGAGTTAAGAAGCACAGCCT
CGCTCCTGGCCACTCAAGAGTCCGATGTGATGGTTGGGCCCTTCAAGCTGAGGTCCAGGA
AGCAGCGGACTTTGTCCATGATTGAAGAAGAGATCCGAGCCGCCCAGGAAAGGGAAGAGG
AGCTGAAGAGGCAGAGGCAAGTCTTGCAGAGTACCCCAAGCCCCAGGGCAAAGAATGCCC
CATCACTGCCCTCCCGAACACCAACACCGTGCTACAAAACTGCTCCAGGTCCTTGAGGCC
ACACGTGTTAATCGAAGAAAGAGCGCCTTGGCCTTGCGCTGGGAGGCGGGGATCTATGCC
AACCAAGAAGAAGAGGACAATGAATAATCAACTTCTTTCCACC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               93-212, - strand, RNAz p=0.687997

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               93-212, - strand, RNAz p=0.687997

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-410, gnl|bosTau2|chr8 (53527757-53527367)
               

               
               14-410, gnl|Hg17|chr9 (109979989-109980376)
               

               
               14-410, gnl|Mm7|chr4 (57898038-57898428)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-410, gnl|bosTau2|chr8 (53527757-53527367)
               

               
               14-410, gnl|Hg17|chr9 (109979989-109980376)
               

               
               14-410, gnl|Mm7|chr4 (57898038-57898428)

	14-410, gnl\|bosTau2\|chr8 (53527757-53527367)
	14-410, gnl\|Hg17\|chr9 (109979989-109980376)
	14-410, gnl\|Mm7\|chr4 (57898038-57898428)