Non-Coding RNA Search

Pig1-36O10

Sequence:


               
               GCTGTCTTTGTCCCTCCGACTGTCCCTGTGTCTGTCACTTGGTTACTGTCATCTTTCCTT
TTTTCTTTCTTGTCTTTCTCTCTCTGTTTCTCTTCTCTCTTTCACTGAATCCTTCTCTTT
CTCCTGTCTGTCTTTTAAAATCTTTTTTTTGTCTGACTCTGGATTTTTCTCTGCCTCTTT
CATTTCTCCTTCTGTCTCTCTCCACATTCGTATTTCTTTCTCTTTTTCTCATTGGTCTCC
TCTCTCCTTGTCCCTGTTTTTCTGTCTGCCTCTCTCTTTCTTTACCATCCCCCCCACTCC
CACCACCTTCTTCAACCTCCTTCCCCCCAGTTGCCTCCAGGGGGACTTCTCAGGGCCTCT
GGGTGGGGGTAACTGCTCCCTGTGGGTTGGGGAGGGCCTGGGGCTGTCTGTGGCCCTCCC
TGCCCGCTGGGCATATGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGTCTTTGTCCCTCCGACTGTCCCTGTGTCTGTCACTTGGTTACTGTCATCTTTCCTT
TTTTCTTTCTTGTCTTTCTCTCTCTGTTTCTCTTCTCTCTTTCACTGAATCCTTCTCTTT
CTCCTGTCTGTCTTTTAAAATCTTTTTTTTGTCTGACTCTGGATTTTTCTCTGCCTCTTT
CATTTCTCCTTCTGTCTCTCTCCACATTCGTATTTCTTTCTCTTTTTCTCATTGGTCTCC
TCTCTCCTTGTCCCTGTTTTTCTGTCTGCCTCTCTCTTTCTTTACCATCCCCCCCACTCC
CACCACCTTCTTCAACCTCCTTCCCCCCAGTTGCCTCCAGGGGGACTTCTCAGGGCCTCT
GGGTGGGGGTAACTGCTCCCTGTGGGTTGGGGAGGGCCTGGGGCTGTCTGTGGCCCTCCC
TGCCCGCTGGGCATATGCTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               284-403, - strand, RNAz p=0.990957

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               284-403, - strand, RNAz p=0.990957

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               128-438, gnl|bosTau2|chr18 (45044373-45044672)
               

               
               128-438, gnl|Hg17|chr19 (47548026-47548307)
               

               
               128-438, gnl|Mm7|chr7 (22130001-22130254)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-438, gnl|bosTau2|chr18 (45044373-45044672)
               

               
               128-438, gnl|Hg17|chr19 (47548026-47548307)
               

               
               128-438, gnl|Mm7|chr7 (22130001-22130254)

	128-438, gnl\|bosTau2\|chr18 (45044373-45044672)
	128-438, gnl\|Hg17\|chr19 (47548026-47548307)
	128-438, gnl\|Mm7\|chr7 (22130001-22130254)