Pig1-38L17
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CCGCTGGGCTTTGCACGGGCCAGCCCATCGCCCCCATCTCATGCCGAGCATGGAGCTGCC
TTGGCCAGGAAGCTCTCCCTGGGTGGAGGCCGGCCTTACACACCATCTCCCCAAGGCGGG
ACCATCCCTGAGCGGCCAGGCTGGAGGGGGGCGCCCTCCCCACAAGCAGCTGAGATGCGG
GGTGGCAGGTCCCCTCGACCAGGCTCCTCTGCGCCAGAACACTCTCCCCACACTGGTGGA
CTGGGCTGCCGCCTGCACAGCGCCCCCAACCTCTCCGACCTACATGGCGGCCGGCCCAAG
CTGCCCAAGCCCCCCACGGACCCGGTGGGAGGGGCATTTGGCCACCCGCAGGCCAGCCCC
CCGCAGCCCTCCCATGGGCTACAGGCCTGCCGGCCCTTGCGTGGTTCACCCAAGCTGCCT
GACTTCCTGCAACGGAACCCCCTGCCTCCTATTCTGGGCTCCCCTACCAAGGCTATGCCT
GCATTCGACTTCACCAAGACCCCCA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCGCTGGGCTTTGCACGGGCCAGCCCATCGCCCCCATCTCATGCCGAGCATGGAGCTGCC
TTGGCCAGGAAGCTCTCCCTGGGTGGAGGCCGGCCTTACACACCATCTCCCCAAGGCGGG
ACCATCCCTGAGCGGCCAGGCTGGAGGGGGGCGCCCTCCCCACAAGCAGCTGAGATGCGG
GGTGGCAGGTCCCCTCGACCAGGCTCCTCTGCGCCAGAACACTCTCCCCACACTGGTGGA
CTGGGCTGCCGCCTGCACAGCGCCCCCAACCTCTCCGACCTACATGGCGGCCGGCCCAAG
CTGCCCAAGCCCCCCACGGACCCGGTGGGAGGGGCATTTGGCCACCCGCAGGCCAGCCCC
CCGCAGCCCTCCCATGGGCTACAGGCCTGCCGGCCCTTGCGTGGTTCACCCAAGCTGCCT
GACTTCCTGCAACGGAACCCCCTGCCTCCTATTCTGGGCTCCCCTACCAAGGCTATGCCT
GCATTCGACTTCACCAAGACCCCCA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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317-424, - strand, RNAmicro p=0.999292 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
317-424, - strand, RNAmicro p=0.999292 |
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5-125, gnl|bosTau2|chr17 (23765056-23764936) |
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5-125, gnl|canFam2|chr26 (3977193-3977031) |
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5-125, gnl|danRer3|chr15 (25259110-25258945) |
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5-125, gnl|echTel1|scaffold_284528 (50897-50739) |
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5-125, gnl|galGal2|chr15 (2617638-2617470) |
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5-125, gnl|hg17|chr12 (131065848-131066009) |
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5-125, gnl|Hg17|chr12 (131065896-131066016) |
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5-125, gnl|loxAfr1|scaffold_136124 (255-416) |
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5-125, gnl|mm7|chr5 (109957417-109957259) |
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5-125, gnl|Mm7|chr5 (109957367-109957255) |
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5-125, gnl|monDom2|scaffold_54 (4175792-4175634) |
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5-125, gnl|oryCun1|scaffold_176435 (46016-46173) |
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5-125, gnl|panTro1|chr10 (134107296-134107457) |
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5-125, gnl|rheMac2|chr11 (133215518-133215679) |
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5-125, gnl|rn3|chr12 (45879763-45879921) |
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189-472, gnl|bosTau2|chr17 (23763952-23763671) |
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189-472, gnl|Hg17|chr12 (131066654-131066935) |
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189-472, gnl|Mm7|chr5 (109956696-109956419) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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5-125, gnl|bosTau2|chr17 (23765056-23764936) |
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5-125, gnl|canFam2|chr26 (3977193-3977031) |
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5-125, gnl|danRer3|chr15 (25259110-25258945) |
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5-125, gnl|echTel1|scaffold_284528 (50897-50739) |
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5-125, gnl|galGal2|chr15 (2617638-2617470) |
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5-125, gnl|hg17|chr12 (131065848-131066009) |
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5-125, gnl|Hg17|chr12 (131065896-131066016) |
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5-125, gnl|loxAfr1|scaffold_136124 (255-416) |
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5-125, gnl|mm7|chr5 (109957417-109957259) |
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5-125, gnl|Mm7|chr5 (109957367-109957255) |
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5-125, gnl|monDom2|scaffold_54 (4175792-4175634) |
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5-125, gnl|oryCun1|scaffold_176435 (46016-46173) |
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5-125, gnl|panTro1|chr10 (134107296-134107457) |
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5-125, gnl|rheMac2|chr11 (133215518-133215679) |
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5-125, gnl|rn3|chr12 (45879763-45879921) |
| |
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189-472, gnl|bosTau2|chr17 (23763952-23763671) |
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189-472, gnl|Hg17|chr12 (131066654-131066935) |
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189-472, gnl|Mm7|chr5 (109956696-109956419) |
