Pig1-39H19
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGCGCCAGCACCGCACAGGTCTGAGTCTGGCACCCTGGCCATGTGCAGCCCTGAGGAG GAGGCCTTGCTGCAGCTGGAGGAGGTCTTCTCAGTCACCCTTGACCATATCAACAACCTT GTCCTCCAACCCCTTCTCAAGGCTGCTGCAGAGCCCTCAGACCCCTGGGGCAGAGAGTGC CTATCCCTCCTACAGCAGCTGCACAGGAGCTCCAGGCGGCTGTGGGAGGTGACGAAGGAA AGCCTGCACTCACTGCAGGAGAGGCTGCACCACCCGGACTCCTTTGGTCTGGAAGCCCTA TTGCTGCTGCACAGCGCTGACCACATCCTGCAGATCCACATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGCGCCAGCACCGCACAGGTCTGAGTCTGGCACCCTGGCCATGTGCAGCCCTGAGGAG GAGGCCTTGCTGCAGCTGGAGGAGGTCTTCTCAGTCACCCTTGACCATATCAACAACCTT GTCCTCCAACCCCTTCTCAAGGCTGCTGCAGAGCCCTCAGACCCCTGGGGCAGAGAGTGC CTATCCCTCCTACAGCAGCTGCACAGGAGCTCCAGGCGGCTGTGGGAGGTGACGAAGGAA AGCCTGCACTCACTGCAGGAGAGGCTGCACCACCCGGACTCCTTTGGTCTGGAAGCCCTA TTGCTGCTGCACAGCGCTGACCACATCCTGCAGATCCACATA |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 33-148, + strand, RNAz p=0.535263 | |
| 149-307, - strand, RNAz p=0.806119 | |
| 224-339, - strand, RNAz p=0.929492 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 33-148, + strand, RNAz p=0.535263 | |
| 149-307, - strand, RNAz p=0.806119 | |
| 224-339, - strand, RNAz p=0.929492 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_182774, + |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 16-148, gnl|bosTau2|chr22 (41202790-41202658) | |
| 16-148, gnl|canFam2|chr20 (45068722-45068517) | |
| 16-148, gnl|dasNov1|scaffold_155776 (3522-3713) | |
| 16-148, gnl|echTel1|scaffold_266918 (844-1017) | |
| 16-148, gnl|hg17|chr3 (46705739-46705937) | |
| 16-148, gnl|Hg17|chr3 (46705962-46705829) | |
| 16-148, gnl|loxAfr1|scaffold_32960 (888-711) | |
| 16-148, gnl|mm7|chr9 (110582012-110581745) | |
| 16-148, gnl|Mm7|chr9 (110581710-110581851) | |
| 16-148, gnl|monDom2|scaffold_5 (80562661-80562847) | |
| 16-148, gnl|oryCun1|scaffold_181410 (40758-40591) | |
| 16-148, gnl|panTro1|chr2 (48144994-48145192) | |
| 16-148, gnl|rheMac2|chr2 (89833764-89833566) | |
| 16-148, gnl|rn3|chr8 (115292434-115292237) | |
| 149-339, gnl|bosTau2|chr22 (41201915-41201725) | |
| 149-339, gnl|canFam2|chr20 (45069803-45069623) | |
| 149-339, gnl|hg17|chr3 (46704588-46704768) | |
| 149-339, gnl|Hg17|chr3 (46704787-46704597) | |
| 149-339, gnl|loxAfr1|scaffold_24408 (1476-1650) | |
| 149-339, gnl|mm7|chr9 (110582773-110582593) | |
| 149-339, gnl|Mm7|chr9 (110582572-110582762) | |
| 149-339, gnl|monDom2|scaffold_5 (80557523-80557703) | |
| 149-339, gnl|oryCun1|scaffold_181410 (41495-41315) | |
| 149-339, gnl|panTro1|chr2 (48143841-48144021) | |
| 149-339, gnl|rheMac2|chr2 (89834928-89834748) | |
| 149-339, gnl|rn3|chr8 (115293235-115293055) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-148, gnl|bosTau2|chr22 (41202790-41202658) | |
| 16-148, gnl|canFam2|chr20 (45068722-45068517) | |
| 16-148, gnl|dasNov1|scaffold_155776 (3522-3713) | |
| 16-148, gnl|echTel1|scaffold_266918 (844-1017) | |
| 16-148, gnl|hg17|chr3 (46705739-46705937) | |
| 16-148, gnl|Hg17|chr3 (46705962-46705829) | |
| 16-148, gnl|loxAfr1|scaffold_32960 (888-711) | |
| 16-148, gnl|mm7|chr9 (110582012-110581745) | |
| 16-148, gnl|Mm7|chr9 (110581710-110581851) | |
| 16-148, gnl|monDom2|scaffold_5 (80562661-80562847) | |
| 16-148, gnl|oryCun1|scaffold_181410 (40758-40591) | |
| 16-148, gnl|panTro1|chr2 (48144994-48145192) | |
| 16-148, gnl|rheMac2|chr2 (89833764-89833566) | |
| 16-148, gnl|rn3|chr8 (115292434-115292237) | |
| 149-339, gnl|bosTau2|chr22 (41201915-41201725) | |
| 149-339, gnl|canFam2|chr20 (45069803-45069623) | |
| 149-339, gnl|hg17|chr3 (46704588-46704768) | |
| 149-339, gnl|Hg17|chr3 (46704787-46704597) | |
| 149-339, gnl|loxAfr1|scaffold_24408 (1476-1650) | |
| 149-339, gnl|mm7|chr9 (110582773-110582593) | |
| 149-339, gnl|Mm7|chr9 (110582572-110582762) | |
| 149-339, gnl|monDom2|scaffold_5 (80557523-80557703) | |
| 149-339, gnl|oryCun1|scaffold_181410 (41495-41315) | |
| 149-339, gnl|panTro1|chr2 (48143841-48144021) | |
| 149-339, gnl|rheMac2|chr2 (89834928-89834748) | |
| 149-339, gnl|rn3|chr8 (115293235-115293055) |