Non-Coding RNA Search

Pig1-39I21

Sequence:


               
               GCCCACGCGTCCGCCAAAGCAAAGCGCAGCAACTGCAACAAAACCCCTGAGTCCCCCTCA
GGGAAGAAGAGTTTTCTCATTGGCTAATTGCTTTATTGGTAGCACTGACCTGCAGAGCAG
CTGCAGGGGCCTGGATGAAGGCTTAGGCCTCAGAATAATGTGCTCCATTAGAACCAGGGC
AAGGCATTTTTTGTTTACTCAATTGGAGCTCCTTGCAAAGTGCCATTAACCCCAGCCCAA
CCGCATGCGTGTTGCAAAAGCCAAAGGTCACACCAGTCGGGCTGTAGGCGCAGCCAGCTT
TGCCGGAGTAGTAGGGAAGAGGCATCCTGCTGGCATCACCCTCCCTGAGCTTGGCCCGAT
CCCCAGGGGCCCGGGGCTTTGACCAAAGCAAGCATTTGCACAACTTGTTTACATTTCCCA
ATTGCTGAATCATGTTATTGATGATTACACAGTTTTGATCTGAGCACCATCAATCACAAC
ATGAAAAAAATTCCTCCCACTGACCCTCTCTTTTCTATTTCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGCCAAAGCAAAGCGCAGCAACTGCAACAAAACCCCTGAGTCCCCCTCA
GGGAAGAAGAGTTTTCTCATTGGCTAATTGCTTTATTGGTAGCACTGACCTGCAGAGCAG
CTGCAGGGGCCTGGATGAAGGCTTAGGCCTCAGAATAATGTGCTCCATTAGAACCAGGGC
AAGGCATTTTTTGTTTACTCAATTGGAGCTCCTTGCAAAGTGCCATTAACCCCAGCCCAA
CCGCATGCGTGTTGCAAAAGCCAAAGGTCACACCAGTCGGGCTGTAGGCGCAGCCAGCTT
TGCCGGAGTAGTAGGGAAGAGGCATCCTGCTGGCATCACCCTCCCTGAGCTTGGCCCGAT
CCCCAGGGGCCCGGGGCTTTGACCAAAGCAAGCATTTGCACAACTTGTTTACATTTCCCA
ATTGCTGAATCATGTTATTGATGATTACACAGTTTTGATCTGAGCACCATCAATCACAAC
ATGAAAAAAATTCCTCCCACTGACCCTCTCTTTTCTATTTCTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               14-209, + strand, RNAz p=0.781817

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               14-209, + strand, RNAz p=0.781817

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               14-514, gnl|bosTau2|chr24 (42612153-42612660)
               

               
               14-514, gnl|Hg17|chr18 (53264049-53264560)
               

               
               14-514, gnl|Mm7|chr18 (64738892-64739423)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-514, gnl|bosTau2|chr24 (42612153-42612660)
               

               
               14-514, gnl|Hg17|chr18 (53264049-53264560)
               

               
               14-514, gnl|Mm7|chr18 (64738892-64739423)

	14-514, gnl\|bosTau2\|chr24 (42612153-42612660)
	14-514, gnl\|Hg17\|chr18 (53264049-53264560)
	14-514, gnl\|Mm7\|chr18 (64738892-64739423)