Non-Coding RNA Search

Pig1-3A15

Sequence:


               
               GCTCGCCCTGCAGATCTGCTGACGCTTCCTTTCGGCCCAGGTGCTCTGGGCTGAGGTGCC
AAAGGTTCCCTATAAAGTGCTGGGGCTCCGGCCGCGGCCACTCACCCTCCACTCGCCGCG
CACCGCCGGGAACCGCGGGGACCACCATGGTGAGGCTGGTGCTGCCCAACCCGGGCCTGG
AGGCCCGGATCCCGTCGCACGCGCAGCTGGAGCGCATCGAGGTGGAGGAGGGCGGCTCCC
GGCCCAAGTGGGACAACAAGGCCCAGTACATGCTCACCTGCGTGGGCTTCTGTGTGGGCC
TGGGCAACGTGTGGCGCTTCCCCTACCTGTGCCAGAGCCACGGTGGAGGGGCATTTATGA
TCCCTTTCCTCATCCTGCTGGTCTTGGAGGGGATCCCGCTGCTGCACCTGGAGTTCGCCA
TCGGGCAGAGGCTGCGCAAGGGAAGCGTGGGCGTCTGGAGCGCCATCCATCCGGCGCTGA
AGGGCTTGGGCGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCGCCCTGCAGATCTGCTGACGCTTCCTTTCGGCCCAGGTGCTCTGGGCTGAGGTGCC
AAAGGTTCCCTATAAAGTGCTGGGGCTCCGGCCGCGGCCACTCACCCTCCACTCGCCGCG
CACCGCCGGGAACCGCGGGGACCACCATGGTGAGGCTGGTGCTGCCCAACCCGGGCCTGG
AGGCCCGGATCCCGTCGCACGCGCAGCTGGAGCGCATCGAGGTGGAGGAGGGCGGCTCCC
GGCCCAAGTGGGACAACAAGGCCCAGTACATGCTCACCTGCGTGGGCTTCTGTGTGGGCC
TGGGCAACGTGTGGCGCTTCCCCTACCTGTGCCAGAGCCACGGTGGAGGGGCATTTATGA
TCCCTTTCCTCATCCTGCTGGTCTTGGAGGGGATCCCGCTGCTGCACCTGGAGTTCGCCA
TCGGGCAGAGGCTGCGCAAGGGAAGCGTGGGCGTCTGGAGCGCCATCCATCCGGCGCTGA
AGGGCTTGGGCGTGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               141-260, - strand, RNAz p=0.516356

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               141-260, - strand, RNAz p=0.516356

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               177-291, - strand, RNAmicro p=0.981646

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               177-291, - strand, RNAmicro p=0.981646

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-349, gnl|bosTau2|chr20 (42706701-42706361)
               

               
               2-349, gnl|Hg17|chr5 (1254608-1254968)
               

               
               2-349, gnl|Mm7|chr13 (70633033-70632671)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-349, gnl|bosTau2|chr20 (42706701-42706361)
               

               
               2-349, gnl|Hg17|chr5 (1254608-1254968)
               

               
               2-349, gnl|Mm7|chr13 (70633033-70632671)

	2-349, gnl\|bosTau2\|chr20 (42706701-42706361)
	2-349, gnl\|Hg17\|chr5 (1254608-1254968)
	2-349, gnl\|Mm7\|chr13 (70633033-70632671)