Non-Coding RNA Search

Pig1-3L24

Sequence:


               
               GATTCTTTTGTATGGTGCCAACACTGGTGCCCCGGGTATAAAGGCACTCTACAGTGCCTG
CCGCAGAGGGATAGAGGTTTACATGCATGTCTAGATGTGTGTATATCCCTAAGAGAATTT
GGAGAGTTTATTAGAACTCAGATTCCAGGGACCCGCAACCAGATTTACTGAATTAGAATT
ATCAGGGACGTCTAGGAATCTGTATTTTTAAAAGCTGCCATGCATGGATGGCAATAATAA
ATTTGATGTTATCAACCCACGTGAGGTGATGAACCAGAGCCATTCTAAATAATGAGAACT
GAAACAATATTGCCACTGAATAGACTGGAGTATCTCTGGGGAAGAGGGGCTGTGATGGGT
TGGTGATTTAAGGGCCCTGCACCTGAGTACCAGGAAGAAGCCCTTTTATATCTGAATTAT
TCAGCAATGCGTATGCTGTCTAGGCCGGTGGCCAAAGCACCAAATGGACCCCTATGCTGC
AGGTGTGGTCCTAAAAAGACCCCCCCCAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTCTTTTGTATGGTGCCAACACTGGTGCCCCGGGTATAAAGGCACTCTACAGTGCCTG
CCGCAGAGGGATAGAGGTTTACATGCATGTCTAGATGTGTGTATATCCCTAAGAGAATTT
GGAGAGTTTATTAGAACTCAGATTCCAGGGACCCGCAACCAGATTTACTGAATTAGAATT
ATCAGGGACGTCTAGGAATCTGTATTTTTAAAAGCTGCCATGCATGGATGGCAATAATAA
ATTTGATGTTATCAACCCACGTGAGGTGATGAACCAGAGCCATTCTAAATAATGAGAACT
GAAACAATATTGCCACTGAATAGACTGGAGTATCTCTGGGGAAGAGGGGCTGTGATGGGT
TGGTGATTTAAGGGCCCTGCACCTGAGTACCAGGAAGAAGCCCTTTTATATCTGAATTAT
TCAGCAATGCGTATGCTGTCTAGGCCGGTGGCCAAAGCACCAAATGGACCCCTATGCTGC
AGGTGTGGTCCTAAAAAGACCCCCCCCAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               317-424, - strand, RNAz p=0.818371

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               317-424, - strand, RNAz p=0.818371

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               96-279, gnl|bosTau2|chr3 (31195995-31196184)
               

               
               96-279, gnl|Hg17|chr1 (109356404-109356562)
               


               
               317-440, gnl|bosTau2|chr3 (31196261-31196385)
               

               
               317-440, gnl|Hg17|chr1 (109356640-109357085)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-279, gnl|bosTau2|chr3 (31195995-31196184)
               

               
               96-279, gnl|Hg17|chr1 (109356404-109356562)
               


               
               317-440, gnl|bosTau2|chr3 (31196261-31196385)
               

               
               317-440, gnl|Hg17|chr1 (109356640-109357085)

	96-279, gnl\|bosTau2\|chr3 (31195995-31196184)
	96-279, gnl\|Hg17\|chr1 (109356404-109356562)

	317-440, gnl\|bosTau2\|chr3 (31196261-31196385)
	317-440, gnl\|Hg17\|chr1 (109356640-109357085)