Pig1-3O13
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTCGACCGGCTCCAGGTGCAGGAGTTCATGCTCAGCTTCCTCCGAGACCCCTTGCGAGA GATAGAGGAGACTTACTTCTTCCTGGACGAGTTTGTCACCTTCCTGTTCTCCAAGGAGAA CAGCGTGTGGAACTCGCAGCTGGATGCCGTGTGCCCAGACACCATGAACAACCCCCTTTC CCACTACTGGATCTCCTCCTCTCACAACACGTACCTGACCGGGGACCAGTTCTCCAGCGA GTCCTCCCTGGAAGCCTACGCCCGCTGCCTGCGGATGGGCTGCCGCTGCATTGAGTTGGA CTGCTGGGACGGCCCAGACGGGATGCCGGTCATTTACCATGGACACACTCTGACCACCAA GATCAAGTTCTCAGACGTCCTGCACACCATCAAGGAGCACGCCTTTGTGGCCTCAGAGTA CCCGGTCATCCTGTCCATCGAGGACCACTGCAGCATTGCCCAGCAGAGGAACATGGCCCA GTATTTCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTCGACCGGCTCCAGGTGCAGGAGTTCATGCTCAGCTTCCTCCGAGACCCCTTGCGAGA GATAGAGGAGACTTACTTCTTCCTGGACGAGTTTGTCACCTTCCTGTTCTCCAAGGAGAA CAGCGTGTGGAACTCGCAGCTGGATGCCGTGTGCCCAGACACCATGAACAACCCCCTTTC CCACTACTGGATCTCCTCCTCTCACAACACGTACCTGACCGGGGACCAGTTCTCCAGCGA GTCCTCCCTGGAAGCCTACGCCCGCTGCCTGCGGATGGGCTGCCGCTGCATTGAGTTGGA CTGCTGGGACGGCCCAGACGGGATGCCGGTCATTTACCATGGACACACTCTGACCACCAA GATCAAGTTCTCAGACGTCCTGCACACCATCAAGGAGCACGCCTTTGTGGCCTCAGAGTA CCCGGTCATCCTGTCCATCGAGGACCACTGCAGCATTGCCCAGCAGAGGAACATGGCCCA GTATTTCAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 77-195, - strand, RNAz p=0.643651 | |
| 77-168, - strand, RNAz p=0.912988 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 77-195, - strand, RNAz p=0.643651 | |
| 77-168, - strand, RNAz p=0.912988 |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 77-212, gnl|bosTau2|chr13 (51394043-51394177) | |
| 77-212, gnl|canFam2|chr24 (32174537-32174706) | |
| 77-212, gnl|danRer3|chr18 (2751174-2751311) | |
| 77-212, gnl|dasNov1|scaffold_65121 (8547-8392) | |
| 77-212, gnl|echTel1|scaffold_297850 (4-139) | |
| 77-212, gnl|fr1|chrUn (147178763-147178594) | |
| 77-212, gnl|galGal2|chr20 (4658659-4658803) | |
| 77-212, gnl|hg17|chr20 (39225749-39225915) | |
| 77-212, gnl|Hg17|chr20 (39225755-39225889) | |
| 77-212, gnl|loxAfr1|scaffold_144323 (237-403) | |
| 77-212, gnl|mm7|chr2 (160492958-160493123) | |
| 77-212, gnl|Mm7|chr2 (160492966-160493098) | |
| 77-212, gnl|monDom2|scaffold_6 (6740617-6740768) | |
| 77-212, gnl|oryCun1|scaffold_211281 (5655-5787) | |
| 77-212, gnl|panTro1|chr21 (41663278-41663444) | |
| 77-212, gnl|rheMac2|chr10 (23293945-23293779) | |
| 77-212, gnl|rn3|chr3 (151448937-151449102) | |
| 77-212, gnl|tetNig1|chr9 (5414330-5414479) | |
| 77-212, gnl|xenTro1|scaffold_35 (1196312-1196458) | |
| 297-419, gnl|bosTau2|chr13 (51394438-51394560) | |
| 297-419, gnl|canFam2|chr24 (32174929-32175063) | |
| 297-419, gnl|canFam2|chr5 (73121590-73121422) | |
| 297-419, gnl|danRer3|chr18 (3956217-3956367) | |
| 297-419, gnl|danRer3|chr18 (2763857-2763984) | |
| 297-419, gnl|dasNov1|scaffold_3327 (39707-39869) | |
| 297-419, gnl|dasNov1|scaffold_65121 (8170-8043) | |
| 297-419, gnl|echTel1|scaffold_287458 (6698-6864) | |
| 297-419, gnl|echTel1|scaffold_297850 (382-515) | |
| 297-419, gnl|fr1|chrUn (139170361-139170495) | |
| 297-419, gnl|fr1|chrUn (147177625-147177498) | |
| 297-419, gnl|galGal2|chr20 (4659352-4659479) | |
| 297-419, gnl|galGal2|chrUn (72767270-72767094) | |
| 297-419, gnl|hg17|chr16 (80486887-80487050) | |
| 297-419, gnl|hg17|chr20 (39226135-39226269) | |
| 297-419, gnl|Hg17|chr20 (39226135-39226257) | |
| 297-419, gnl|loxAfr1|scaffold_144323 (612-746) | |
| 297-419, gnl|loxAfr1|scaffold_6239 (11825-11658) | |
| 297-419, gnl|mm7|chr2 (160493344-160493478) | |
| 297-419, gnl|Mm7|chr2 (160493344-160493466) | |
| 297-419, gnl|mm7|chr8 (116196395-116196561) | |
| 297-419, gnl|monDom2|scaffold_1 (133624597-133624441) | |
| 297-419, gnl|monDom2|scaffold_6 (6741178-6741312) | |
| 297-419, gnl|oryCun1|scaffold_202710 (76155-76270) | |
| 297-419, gnl|oryCun1|scaffold_203163 (40486-40615) | |
| 297-419, gnl|panTro1|chr18 (75364032-75364195) | |
| 297-419, gnl|panTro1|chr21 (41663664-41663798) | |
| 297-419, gnl|rheMac2|chr10 (23293564-23293430) | |
| 297-419, gnl|rheMac2|chr20 (80038223-80038386) | |
| 297-419, gnl|rn3|chr19 (47931240-47931074) | |
| 297-419, gnl|rn3|chr3 (151449325-151449459) | |
| 297-419, gnl|tetNig1|chr13 (918589-918717) | |
| 297-419, gnl|tetNig1|chr9 (5415321-5415448) | |
| 297-419, gnl|xenTro1|scaffold_1814 (26891-27025) | |
| 297-419, gnl|xenTro1|scaffold_79 (637938-638076) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-212, gnl|bosTau2|chr13 (51394043-51394177) | |
| 77-212, gnl|canFam2|chr24 (32174537-32174706) | |
| 77-212, gnl|danRer3|chr18 (2751174-2751311) | |
| 77-212, gnl|dasNov1|scaffold_65121 (8547-8392) | |
| 77-212, gnl|echTel1|scaffold_297850 (4-139) | |
| 77-212, gnl|fr1|chrUn (147178763-147178594) | |
| 77-212, gnl|galGal2|chr20 (4658659-4658803) | |
| 77-212, gnl|hg17|chr20 (39225749-39225915) | |
| 77-212, gnl|Hg17|chr20 (39225755-39225889) | |
| 77-212, gnl|loxAfr1|scaffold_144323 (237-403) | |
| 77-212, gnl|mm7|chr2 (160492958-160493123) | |
| 77-212, gnl|Mm7|chr2 (160492966-160493098) | |
| 77-212, gnl|monDom2|scaffold_6 (6740617-6740768) | |
| 77-212, gnl|oryCun1|scaffold_211281 (5655-5787) | |
| 77-212, gnl|panTro1|chr21 (41663278-41663444) | |
| 77-212, gnl|rheMac2|chr10 (23293945-23293779) | |
| 77-212, gnl|rn3|chr3 (151448937-151449102) | |
| 77-212, gnl|tetNig1|chr9 (5414330-5414479) | |
| 77-212, gnl|xenTro1|scaffold_35 (1196312-1196458) | |
| 297-419, gnl|bosTau2|chr13 (51394438-51394560) | |
| 297-419, gnl|canFam2|chr24 (32174929-32175063) | |
| 297-419, gnl|canFam2|chr5 (73121590-73121422) | |
| 297-419, gnl|danRer3|chr18 (3956217-3956367) | |
| 297-419, gnl|danRer3|chr18 (2763857-2763984) | |
| 297-419, gnl|dasNov1|scaffold_3327 (39707-39869) | |
| 297-419, gnl|dasNov1|scaffold_65121 (8170-8043) | |
| 297-419, gnl|echTel1|scaffold_287458 (6698-6864) | |
| 297-419, gnl|echTel1|scaffold_297850 (382-515) | |
| 297-419, gnl|fr1|chrUn (139170361-139170495) | |
| 297-419, gnl|fr1|chrUn (147177625-147177498) | |
| 297-419, gnl|galGal2|chr20 (4659352-4659479) | |
| 297-419, gnl|galGal2|chrUn (72767270-72767094) | |
| 297-419, gnl|hg17|chr16 (80486887-80487050) | |
| 297-419, gnl|hg17|chr20 (39226135-39226269) | |
| 297-419, gnl|Hg17|chr20 (39226135-39226257) | |
| 297-419, gnl|loxAfr1|scaffold_144323 (612-746) | |
| 297-419, gnl|loxAfr1|scaffold_6239 (11825-11658) | |
| 297-419, gnl|mm7|chr2 (160493344-160493478) | |
| 297-419, gnl|Mm7|chr2 (160493344-160493466) | |
| 297-419, gnl|mm7|chr8 (116196395-116196561) | |
| 297-419, gnl|monDom2|scaffold_1 (133624597-133624441) | |
| 297-419, gnl|monDom2|scaffold_6 (6741178-6741312) | |
| 297-419, gnl|oryCun1|scaffold_202710 (76155-76270) | |
| 297-419, gnl|oryCun1|scaffold_203163 (40486-40615) | |
| 297-419, gnl|panTro1|chr18 (75364032-75364195) | |
| 297-419, gnl|panTro1|chr21 (41663664-41663798) | |
| 297-419, gnl|rheMac2|chr10 (23293564-23293430) | |
| 297-419, gnl|rheMac2|chr20 (80038223-80038386) | |
| 297-419, gnl|rn3|chr19 (47931240-47931074) | |
| 297-419, gnl|rn3|chr3 (151449325-151449459) | |
| 297-419, gnl|tetNig1|chr13 (918589-918717) | |
| 297-419, gnl|tetNig1|chr9 (5415321-5415448) | |
| 297-419, gnl|xenTro1|scaffold_1814 (26891-27025) | |
| 297-419, gnl|xenTro1|scaffold_79 (637938-638076) |