Non-Coding RNA Search

Pig1-40D10

Sequence:


               
               GAGGAGCCTGCCTCTGCTCACAACATTCCTGGCCTCTTCCTCAGCAGCTCCCTTTAGAGC
CGACTGCCCCCAGAAGACAGGCGTTTCATGATCTCACACTGTTTTTGAGACTCAAGCAAC
ATCGCTCGGCTTGGTCAGCAGACTTGGCCCGAGTGACTTTTTAGCCGAATTCATTTTAAT
CTACTCATGTTGGGTGGGCCCAGGATAATACCTGCACAGTTGCAAATGGTTTGACAAAGG
CTTGGGGCTGGAGTTGGATTTAGAGCTAAGGAGGGGCGCCTGCCCCACACCCCCAGAAGA
CCTGGCCTCGGTAGCAGAGCGCGCAGATGCTTAGTGGCTTTTCCGGAGCCTCTGCTTTGT
AGGAGGAAAAGTCAGAAGGGACAAAGCGAGCGGGTAGAACGGATTCCTGCCAATAACTTG
TTCATTCTGCAGAGCTCGGTCCCCATAGCCCCGGGTGTCTTAGGACCTCTTAGGAAAGCA
GTTTATATCCCAGTGTGCCCCCAGGCCTTCATCGTGTGCAGCCCTGCCTGGAAACTACAC
TCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGAGCCTGCCTCTGCTCACAACATTCCTGGCCTCTTCCTCAGCAGCTCCCTTTAGAGC
CGACTGCCCCCAGAAGACAGGCGTTTCATGATCTCACACTGTTTTTGAGACTCAAGCAAC
ATCGCTCGGCTTGGTCAGCAGACTTGGCCCGAGTGACTTTTTAGCCGAATTCATTTTAAT
CTACTCATGTTGGGTGGGCCCAGGATAATACCTGCACAGTTGCAAATGGTTTGACAAAGG
CTTGGGGCTGGAGTTGGATTTAGAGCTAAGGAGGGGCGCCTGCCCCACACCCCCAGAAGA
CCTGGCCTCGGTAGCAGAGCGCGCAGATGCTTAGTGGCTTTTCCGGAGCCTCTGCTTTGT
AGGAGGAAAAGTCAGAAGGGACAAAGCGAGCGGGTAGAACGGATTCCTGCCAATAACTTG
TTCATTCTGCAGAGCTCGGTCCCCATAGCCCCGGGTGTCTTAGGACCTCTTAGGAAAGCA
GTTTATATCCCAGTGTGCCCCCAGGCCTTCATCGTGTGCAGCCCTGCCTGGAAACTACAC
TCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               2-118, - strand, RNAz p=0.535683

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-118, - strand, RNAz p=0.535683

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-542, gnl|bosTau2|chr18 (20375375-20375917)
               

               
               2-542, gnl|Hg17|chr16 (48423814-48422986)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-542, gnl|bosTau2|chr18 (20375375-20375917)
               

               
               2-542, gnl|Hg17|chr16 (48423814-48422986)

	2-542, gnl\|bosTau2\|chr18 (20375375-20375917)
	2-542, gnl\|Hg17\|chr16 (48423814-48422986)