Pig1-40D17
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GGCCCACTTTACAAGTACCTGTTGTAATGTGAATGTTTACTTTGCATTTCTGGCCAGGTT
TAGGGGAGGGAAGGGGGGGAAGGGAAAGTTAATTGGGATGTTAACTTTCCGATTACTTAG
AGACCTTTTTAGCTATTTATTTTATTGTTGGAAGGGGGGGCGGGAAATGAAAATGAAATA
AGTCCAAACTAAGAAAGCATCAAGGGCAACCCTAGACGAACTTAAATAAGCTGACTGGTA
ACATGAAGGAGGTGTTACTAGATAGGTCTCCCATGGACAAGTCTTTCTACTTGCTACAAG
AACTTTTCCAAGAAGCTAAAGGGCTGCAAAGAGATGTAAATGCTTGTGAATAGGAATGAT
TATACACTGTGTAAAATGCACTTTTGTTTGCTATATTCCTTTAGAGTCTTAGGTAATTTG
CTGGAAAACCAACTGTTGTTCTGGTGTGACCTGCTTAAATTAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCCCACTTTACAAGTACCTGTTGTAATGTGAATGTTTACTTTGCATTTCTGGCCAGGTT
TAGGGGAGGGAAGGGGGGGAAGGGAAAGTTAATTGGGATGTTAACTTTCCGATTACTTAG
AGACCTTTTTAGCTATTTATTTTATTGTTGGAAGGGGGGGCGGGAAATGAAAATGAAATA
AGTCCAAACTAAGAAAGCATCAAGGGCAACCCTAGACGAACTTAAATAAGCTGACTGGTA
ACATGAAGGAGGTGTTACTAGATAGGTCTCCCATGGACAAGTCTTTCTACTTGCTACAAG
AACTTTTCCAAGAAGCTAAAGGGCTGCAAAGAGATGTAAATGCTTGTGAATAGGAATGAT
TATACACTGTGTAAAATGCACTTTTGTTTGCTATATTCCTTTAGAGTCTTAGGTAATTTG
CTGGAAAACCAACTGTTGTTCTGGTGTGACCTGCTTAAATTAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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60-139, + strand, RNAmicro p=0.995263 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
60-139, + strand, RNAmicro p=0.995263 |
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2-471, gnl|bosTau2|chr10 (37468477-37468013) |
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2-471, gnl|canFam2|chr30 (27817949-27818333) |
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2-471, gnl|dasNov1|scaffold_203642 (1113-730) |
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2-471, gnl|echTel1|scaffold_319467 (2475-2871) |
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2-471, gnl|galGal2|chr10 (6031209-6030903) |
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2-471, gnl|hg17|chr15 (58086159-58086550) |
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2-471, gnl|Hg17|chr15 (58086253-58086733) |
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2-471, gnl|mm7|chr9 (69790653-69790240) |
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2-471, gnl|Mm7|chr9 (69790551-69790042) |
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2-471, gnl|monDom2|scaffold_12 (54682713-54682319) |
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2-471, gnl|oryCun1|scaffold_199370 (6061-5668) |
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2-471, gnl|panTro1|chr16 (58511350-58511739) |
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2-471, gnl|rheMac2|chr7 (38394647-38395023) |
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2-471, gnl|rn3|chr8 (74219583-74219176) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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2-471, gnl|bosTau2|chr10 (37468477-37468013) |
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2-471, gnl|canFam2|chr30 (27817949-27818333) |
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2-471, gnl|dasNov1|scaffold_203642 (1113-730) |
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2-471, gnl|echTel1|scaffold_319467 (2475-2871) |
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2-471, gnl|galGal2|chr10 (6031209-6030903) |
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2-471, gnl|hg17|chr15 (58086159-58086550) |
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2-471, gnl|Hg17|chr15 (58086253-58086733) |
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2-471, gnl|mm7|chr9 (69790653-69790240) |
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2-471, gnl|Mm7|chr9 (69790551-69790042) |
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2-471, gnl|monDom2|scaffold_12 (54682713-54682319) |
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2-471, gnl|oryCun1|scaffold_199370 (6061-5668) |
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2-471, gnl|panTro1|chr16 (58511350-58511739) |
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2-471, gnl|rheMac2|chr7 (38394647-38395023) |
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2-471, gnl|rn3|chr8 (74219583-74219176) |
