Non-Coding RNA Search

Pig1-40F05

Sequence:


               
               GGGAAGCATGGGCTGATGTATGCCAAATGGCACTTTGGTAAAAGTGGAATGTCAGGATTC
TGGGCAGGAGTGGAACGAAGAACCGTAATTTGTGATGAGTCCATTTTTCAAGCTGGTTAC
AGAATGAGCTCCTTGATGGCTCACCAGGCTTTTCAAATTGCAATTGCATTTAGGGATGTG
CTGTTTATTTTCTTTCAACTGTCATACTCCAGTGATTCTAAGATATCCTTTTTTATATGT
ATTTTAACATCTGTGAAATCAGATGCATCTTATAATTCATGGCAGCTTACAACTGCTTTT
GATCAGCAGGTTGATGTGACAGAGTTGTCACTGCCTGTGACTTAGTCACAGATATGTCTC
GCCAACTGAGTTAAGCACGAAATCATGCCTACATTTGTTGCATTTAATTGCAGCTCATAA
CAGCTTCAAAAAATTCAGCTGTGAGTCAATATTCAAAGGAAGAGTTAATTATTACATAAT
CCCAGAAGCAAAATAGCATGTTATATAATTTTAAATACTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAGCATGGGCTGATGTATGCCAAATGGCACTTTGGTAAAAGTGGAATGTCAGGATTC
TGGGCAGGAGTGGAACGAAGAACCGTAATTTGTGATGAGTCCATTTTTCAAGCTGGTTAC
AGAATGAGCTCCTTGATGGCTCACCAGGCTTTTCAAATTGCAATTGCATTTAGGGATGTG
CTGTTTATTTTCTTTCAACTGTCATACTCCAGTGATTCTAAGATATCCTTTTTTATATGT
ATTTTAACATCTGTGAAATCAGATGCATCTTATAATTCATGGCAGCTTACAACTGCTTTT
GATCAGCAGGTTGATGTGACAGAGTTGTCACTGCCTGTGACTTAGTCACAGATATGTCTC
GCCAACTGAGTTAAGCACGAAATCATGCCTACATTTGTTGCATTTAATTGCAGCTCATAA
CAGCTTCAAAAAATTCAGCTGTGAGTCAATATTCAAAGGAAGAGTTAATTATTACATAAT
CCCAGAAGCAAAATAGCATGTTATATAATTTTAAATACTTTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               226-375, - strand, RNAz p=0.985692

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               226-375, - strand, RNAz p=0.985692

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-517, gnl|bosTau2|chr20 (37564769-37565289)
               

               
               1-517, gnl|Hg17|chr9 (76036671-76037226)
               

               
               1-517, gnl|Mm7|chr19 (17262687-17262235)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-517, gnl|bosTau2|chr20 (37564769-37565289)
               

               
               1-517, gnl|Hg17|chr9 (76036671-76037226)
               

               
               1-517, gnl|Mm7|chr19 (17262687-17262235)

	1-517, gnl\|bosTau2\|chr20 (37564769-37565289)
	1-517, gnl\|Hg17\|chr9 (76036671-76037226)
	1-517, gnl\|Mm7\|chr19 (17262687-17262235)