Non-Coding RNA Search

Pig1-45C12

Sequence:


               
               GACGAGCTTGCACGCGCCGGCCTCGGGTGACAGCCTCCCTCCTCCGCCAGGATCTGAGCC
ATGAGTTATGTCCCACCGAAGCACCCTACAGTGACACGCGGTTAGCATGGCTGAGAAGCT
AGACCTGCATGGAGGGCTGGCAGAAATGGGTGCCTGGCCGAGTCCTAGGCAGTTGGTGGC
AGCAAGGAGGAGAGGCCGGGGCGTCGGGGGCAAGGCCGAGCTGGAGCAGTTCCGAAGTGC
ATGAACGGGCCAGAGCCCTACCCACCCGGCCCATCATGGTCCAGAGACTGTGGATGAGCC
GCCTGCTGCGGCATCGGAAAGCCCAGCTCCTGCTGGTTAACCTGCTGACGTTCGGCCTGG
AGGTGTGCCTGGCCGCAGGCATCACCTACGTGCCACCCCTGCTGTTGGAAGTGGGGGTAG
AGGAGAAGTTCATGACCATGGTGCTGGGCATCGGTCCAGTGCTGGGCCTGGTCTCCGTCC
CACTCCTAGGCTCAGCCAGTGACCACTGGCGTGGGCGCTATGGTCGCCGGAGGCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGAGCTTGCACGCGCCGGCCTCGGGTGACAGCCTCCCTCCTCCGCCAGGATCTGAGCC
ATGAGTTATGTCCCACCGAAGCACCCTACAGTGACACGCGGTTAGCATGGCTGAGAAGCT
AGACCTGCATGGAGGGCTGGCAGAAATGGGTGCCTGGCCGAGTCCTAGGCAGTTGGTGGC
AGCAAGGAGGAGAGGCCGGGGCGTCGGGGGCAAGGCCGAGCTGGAGCAGTTCCGAAGTGC
ATGAACGGGCCAGAGCCCTACCCACCCGGCCCATCATGGTCCAGAGACTGTGGATGAGCC
GCCTGCTGCGGCATCGGAAAGCCCAGCTCCTGCTGGTTAACCTGCTGACGTTCGGCCTGG
AGGTGTGCCTGGCCGCAGGCATCACCTACGTGCCACCCCTGCTGTTGGAAGTGGGGGTAG
AGGAGAAGTTCATGACCATGGTGCTGGGCATCGGTCCAGTGCTGGGCCTGGTCTCCGTCC
CACTCCTAGGCTCAGCCAGTGACCACTGGCGTGGGCGCTATGGTCGCCGGAGGCCCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               308-427, + strand, RNAz p=0.869831

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               308-427, + strand, RNAz p=0.869831

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of BC050416, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC050416, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               36-448, gnl|bosTau2|chr16 (2930171-2929761)
               

               
               36-448, gnl|Hg17|chr1 (202365685-202365269)
               

               
               36-448, gnl|Mm7|chr1 (131872169-131872578)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-448, gnl|bosTau2|chr16 (2930171-2929761)
               

               
               36-448, gnl|Hg17|chr1 (202365685-202365269)
               

               
               36-448, gnl|Mm7|chr1 (131872169-131872578)

	36-448, gnl\|bosTau2\|chr16 (2930171-2929761)
	36-448, gnl\|Hg17\|chr1 (202365685-202365269)
	36-448, gnl\|Mm7\|chr1 (131872169-131872578)