Non-Coding RNA Search

Pig1-45J05

Sequence:


               
               GGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTGGAACGGGGCCG
CCGGATCTCCCTCTGCACCCACGACCCGGCCAAGACCTGCTCCCGAGACCACGCTCAGAG
CTCGGCCACCTGGAGCTGCTCGCAGCCCTTCAAAGTCGTCTGCGTCTACATCGCCTTCTA
CAGCACGGACTACAGGCTGGTCCAGAAGGTGTGCCCGGATTACAACTACCACAGCGATAC
TCCCTACTACCCCTCCGGGTGACCCTGGACAGGCCACAGTGGCCGGGCCAGGGCTGGAAG
GACAGGCCTGCCCACGCAGGAAGCCATCTGTCTGGATGCTGGGCAGGGAGGGGAAGGGGC
CGCAGGCAGGGAGCACGGGGGCGGAGAGGAGGCGATGCCAAGCAGGGCCAGGGCCAAGTC
TCAGGCGGCGGGGAACGGGGCGCAGGTGCGGGCCCCAACGTGAGGTTGTGGAGTGACCAG
GACACAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTGGAACGGGGCCG
CCGGATCTCCCTCTGCACCCACGACCCGGCCAAGACCTGCTCCCGAGACCACGCTCAGAG
CTCGGCCACCTGGAGCTGCTCGCAGCCCTTCAAAGTCGTCTGCGTCTACATCGCCTTCTA
CAGCACGGACTACAGGCTGGTCCAGAAGGTGTGCCCGGATTACAACTACCACAGCGATAC
TCCCTACTACCCCTCCGGGTGACCCTGGACAGGCCACAGTGGCCGGGCCAGGGCTGGAAG
GACAGGCCTGCCCACGCAGGAAGCCATCTGTCTGGATGCTGGGCAGGGAGGGGAAGGGGC
CGCAGGCAGGGAGCACGGGGGCGGAGAGGAGGCGATGCCAAGCAGGGCCAGGGCCAAGTC
TCAGGCGGCGGGGAACGGGGCGCAGGTGCGGGCCCCAACGTGAGGTTGTGGAGTGACCAG
GACACAGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|17483922|gb|AAL40247.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|17483922|gb|AAL40247.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               241-360, + strand, RNAz p=0.994891

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               241-360, + strand, RNAz p=0.994891

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of NM_007225, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_007225, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-489, gnl|bosTau2|chr19 (29805282-29804795)
               

               
               2-489, gnl|Hg17|chr17 (45011401-45011881)
               

               
               2-489, gnl|Mm7|chr11 (95620127-95619686)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-489, gnl|bosTau2|chr19 (29805282-29804795)
               

               
               2-489, gnl|Hg17|chr17 (45011401-45011881)
               

               
               2-489, gnl|Mm7|chr11 (95620127-95619686)

	2-489, gnl\|bosTau2\|chr19 (29805282-29804795)
	2-489, gnl\|Hg17\|chr17 (45011401-45011881)
	2-489, gnl\|Mm7\|chr11 (95620127-95619686)