Non-Coding RNA Search

Pig1-46C18

Sequence:


               
               GCGGACGCGTGGGTCGCCCACGCGTCCGAGAAATTTGAATGGGTTTGTAAATTCCATCGA
ATATCTTATGATTCTGAATGATTAGGAAAGGAGTTTATAAGTTGTAACTAGTTGAGTACT
AATATTTTAGCCAGTGGAAACAAATATATGAAGTATTTGTCAAATTTGAATATTTTTCCT
TTTGAAGACTTTAGGCTTCTTTTCTGTGTTCAGTCACAGGTAATAGCTGGTTTTTAATCT
AGTCACAAGGAATTTTTTCTCTGAGACTCGTTCTATTTTGTATTTTCTATGAAAATGAAA
AGTAGGATAATATGTATCTCTGTTATCCAAAGACTAAGCTATTTCAGATTCCTTTGCGTA
GTAGCAAATTAAGTCATCTAAAATCTACTTTATCCTTTACTCTTGTATTTATACATACTA
TGTTTTTTGCCATAATTTAATTTTGAAATTGGCACTAAAATCACATAGTCCCATAGGAAA
AGAGAAATGTCAGGAACATCTGCACATCTCTTGTCTTTATACTTCTTAAATGCTGTAGTT
CTCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACGCGTGGGTCGCCCACGCGTCCGAGAAATTTGAATGGGTTTGTAAATTCCATCGA
ATATCTTATGATTCTGAATGATTAGGAAAGGAGTTTATAAGTTGTAACTAGTTGAGTACT
AATATTTTAGCCAGTGGAAACAAATATATGAAGTATTTGTCAAATTTGAATATTTTTCCT
TTTGAAGACTTTAGGCTTCTTTTCTGTGTTCAGTCACAGGTAATAGCTGGTTTTTAATCT
AGTCACAAGGAATTTTTTCTCTGAGACTCGTTCTATTTTGTATTTTCTATGAAAATGAAA
AGTAGGATAATATGTATCTCTGTTATCCAAAGACTAAGCTATTTCAGATTCCTTTGCGTA
GTAGCAAATTAAGTCATCTAAAATCTACTTTATCCTTTACTCTTGTATTTATACATACTA
TGTTTTTTGCCATAATTTAATTTTGAAATTGGCACTAAAATCACATAGTCCCATAGGAAA
AGAGAAATGTCAGGAACATCTGCACATCTCTTGTCTTTATACTTCTTAAATGCTGTAGTT
CTCCTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               322-425, - strand, RNAz p=0.569933

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               322-425, - strand, RNAz p=0.569933

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-210, gnl|bosTau2|chr18 (27180356-27180174)
               


               
               322-535, gnl|bosTau2|chr18 (27179988-27179779)
               

               
               322-535, gnl|Hg17|chr4 (74444545-74444320)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-210, gnl|bosTau2|chr18 (27180356-27180174)
               


               
               322-535, gnl|bosTau2|chr18 (27179988-27179779)
               

               
               322-535, gnl|Hg17|chr4 (74444545-74444320)

	31-210, gnl\|bosTau2\|chr18 (27180356-27180174)

	322-535, gnl\|bosTau2\|chr18 (27179988-27179779)
	322-535, gnl\|Hg17\|chr4 (74444545-74444320)