Non-Coding RNA Search

Pig1-46N20

Sequence:


               
               GCTGAGCCCCATGGCCAGGTCCAGAGGGCGCAGGCGGAAACAAGCCAGACCTCCTATCCC
TCCCCTGTGTCTGTCTCCATGAAGCCTGACCTCCCGGCCCCTCTCCCCACTCAGGCTGCC
CCAAAGCAGCCACTGTTTGTCCCCACAACCTCAGGCACCAGCACCCCTCCAGGACTGGCT
CTGCCACATACTGAAGCCCAGGCAGCCCCCAAACAAGATTCCTCTCCGCACTTGACTTCC
CAGAGGCCCGTGGATATGGTCCAGCTTCTGAAGAAGTACCCCATCGTGTGGCAGGGCCTG
CTGGCCCTCAAGAACGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAATGTC
CTGGCCCACCGTTCCCTGCCCCTCTCTGAAGGCGGGCCCCCTCTGAGGATCGCCCAGCGG
ATGCGGCTGGAGGCCTCACAGCTGGAGGGGGTTGCCCGAAGGATGACGGTGGAGACAGAT
TACTGTCTGCTGCTGGCTCTGCCCTGTGGCCGTGACCAAGAAGACGTTGTGAGCCAGACT
GAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGAGCCCCATGGCCAGGTCCAGAGGGCGCAGGCGGAAACAAGCCAGACCTCCTATCCC
TCCCCTGTGTCTGTCTCCATGAAGCCTGACCTCCCGGCCCCTCTCCCCACTCAGGCTGCC
CCAAAGCAGCCACTGTTTGTCCCCACAACCTCAGGCACCAGCACCCCTCCAGGACTGGCT
CTGCCACATACTGAAGCCCAGGCAGCCCCCAAACAAGATTCCTCTCCGCACTTGACTTCC
CAGAGGCCCGTGGATATGGTCCAGCTTCTGAAGAAGTACCCCATCGTGTGGCAGGGCCTG
CTGGCCCTCAAGAACGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAATGTC
CTGGCCCACCGTTCCCTGCCCCTCTCTGAAGGCGGGCCCCCTCTGAGGATCGCCCAGCGG
ATGCGGCTGGAGGCCTCACAGCTGGAGGGGGTTGCCCGAAGGATGACGGTGGAGACAGAT
TACTGTCTGCTGCTGGCTCTGCCCTGTGGCCGTGACCAAGAAGACGTTGTGAGCCAGACT
GAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|34810497|pdb|1OW1|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34810497|pdb|1OW1|A

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-199, - strand, RNAz p=0.691622

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-199, - strand, RNAz p=0.691622

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-273, gnl|bosTau2|chr16 (36858408-36858680)
               

               
               1-273, gnl|Hg17|chr1 (16009174-16009446)
               

               
               1-273, gnl|Mm7|chr4 (140848823-140848551)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-273, gnl|bosTau2|chr16 (36858408-36858680)
               

               
               1-273, gnl|Hg17|chr1 (16009174-16009446)
               

               
               1-273, gnl|Mm7|chr4 (140848823-140848551)

	1-273, gnl\|bosTau2\|chr16 (36858408-36858680)
	1-273, gnl\|Hg17\|chr1 (16009174-16009446)
	1-273, gnl\|Mm7\|chr4 (140848823-140848551)