Non-Coding RNA Search

Pig1-46P20

Sequence:


               
               ATTGAAGTGTGTGCTTTTGCTGTGATGGGCACTAGAAAAACAGAAGGGGCTGAGGGGCAA
GGACTTCATGAAAGAACTCCATGAAAAAGTCACCTTGTCCCCACCCAAACCTGACGGCTT
CTGAGAACATGGCTAGAGGAGCAAAGACCAAGACTTCTGTCTACCAAAAGGACAAAAGCA
TCAACGAGGAAGCAGTCCCATCCAGTTGACATCAGCAATGTATTTTTTGAATGTTGATTG
TGTACCAAGGTCTGTGCTGAGTGCTGGCATCACAGACACATTCCTGACATTTACAAGGGG
ACACCACCGCCCTGTACACAGGGCAAGTGAGTCATGAGAGGGTGCGTTGAATGTCGTAAT
AAGGGCCAAAAGAAAGTGCTGTCTATAGGACTACAGGGATGGAAAGCTTGACTCTCCTGG
GGGATCAGAAACTTTCCTCACCAAAACAGTATTTGAGATGGAACTATAAGTATGGGTACA
ATTTAGATGGGCAGATATGACCACTGAGACAAGGAGTGGGGACACAGAGAGGACACCTGA
AGCTGAGGACATGCAGTGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGAAGTGTGTGCTTTTGCTGTGATGGGCACTAGAAAAACAGAAGGGGCTGAGGGGCAA
GGACTTCATGAAAGAACTCCATGAAAAAGTCACCTTGTCCCCACCCAAACCTGACGGCTT
CTGAGAACATGGCTAGAGGAGCAAAGACCAAGACTTCTGTCTACCAAAAGGACAAAAGCA
TCAACGAGGAAGCAGTCCCATCCAGTTGACATCAGCAATGTATTTTTTGAATGTTGATTG
TGTACCAAGGTCTGTGCTGAGTGCTGGCATCACAGACACATTCCTGACATTTACAAGGGG
ACACCACCGCCCTGTACACAGGGCAAGTGAGTCATGAGAGGGTGCGTTGAATGTCGTAAT
AAGGGCCAAAAGAAAGTGCTGTCTATAGGACTACAGGGATGGAAAGCTTGACTCTCCTGG
GGGATCAGAAACTTTCCTCACCAAAACAGTATTTGAGATGGAACTATAAGTATGGGTACA
ATTTAGATGGGCAGATATGACCACTGAGACAAGGAGTGGGGACACAGAGAGGACACCTGA
AGCTGAGGACATGCAGTGATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               2-117, - strand, RNAz p=0.798384

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-117, - strand, RNAz p=0.798384

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-355, gnl|bosTau2|chr20 (26025511-26025162)
               

               
               2-355, gnl|Hg17|chr5 (33976319-33976689)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-355, gnl|bosTau2|chr20 (26025511-26025162)
               

               
               2-355, gnl|Hg17|chr5 (33976319-33976689)

	2-355, gnl\|bosTau2\|chr20 (26025511-26025162)
	2-355, gnl\|Hg17\|chr5 (33976319-33976689)