Pig1-47A09
|
GCAGGCTGATCCCCAGTGCCTCTTCCTGCGGCAGCGACTCGAAGCGCTGGGCACCGGCTG
GGAGGAGCTGGGCCGCATATGGGAGAGCCGGCAAGGCCGTCTTGCCCAGGCCCATGGCTT
CCAGGGGTTCCTACGGGATGCACGCCAGGCCGAGGGTGTGCTCAGCAGCCAGGAATACGT
TTTGTCTCACACGGAGATGCCGGGGACACTCCAGGCTGCTGATGCCGCCATCAAGAAACT
GGAAGACTTTATGAGCACCATGGATGCCAATGGCGAGCGGATCCGCGGGCTCCTGGAAGC
CGGGCGCCAGCTGGTGTCTGCGGGCAACATCCATGCCGAGAAGATCCAAGAGAAGGCCGA
CTCCATAGAGAGGAGACACAGGAAGAATCAAGAAGCAGCGCAGCAGCTTTTGGGCCGTCT
TCGGGACAATCGAGAGCAGCAGCATTTCTTGCAAGACTGTCACGAGCTGAAACTCTGGAT
TGACGAGAAGATGCTGACAGCCCAGGATGTGTCCTATGACGAGGCCCGCAACCTGCACA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCAGGCTGATCCCCAGTGCCTCTTCCTGCGGCAGCGACTCGAAGCGCTGGGCACCGGCTG
GGAGGAGCTGGGCCGCATATGGGAGAGCCGGCAAGGCCGTCTTGCCCAGGCCCATGGCTT
CCAGGGGTTCCTACGGGATGCACGCCAGGCCGAGGGTGTGCTCAGCAGCCAGGAATACGT
TTTGTCTCACACGGAGATGCCGGGGACACTCCAGGCTGCTGATGCCGCCATCAAGAAACT
GGAAGACTTTATGAGCACCATGGATGCCAATGGCGAGCGGATCCGCGGGCTCCTGGAAGC
CGGGCGCCAGCTGGTGTCTGCGGGCAACATCCATGCCGAGAAGATCCAAGAGAAGGCCGA
CTCCATAGAGAGGAGACACAGGAAGAATCAAGAAGCAGCGCAGCAGCTTTTGGGCCGTCT
TCGGGACAATCGAGAGCAGCAGCATTTCTTGCAAGACTGTCACGAGCTGAAACTCTGGAT
TGACGAGAAGATGCTGACAGCCCAGGATGTGTCCTATGACGAGGCCCGCAACCTGCACA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-173, gnl|bosTau2|chr29 (36809691-36809862) |
|
2-173, gnl|canFam2|chr18 (53681951-53681397) |
|
2-173, gnl|danRer3|chr17 (43643394-43643951) |
|
2-173, gnl|dasNov1|scaffold_16769 (54517-53961) |
|
2-173, gnl|echTel1|scaffold_281684 (15435-14882) |
|
2-173, gnl|fr1|chrUn (4379436-4379971) |
|
2-173, gnl|galGal2|chr3 (2641939-2642492) |
|
2-173, gnl|hg17|chr11 (66224560-66225114) |
|
2-173, gnl|Hg17|chr11 (66224743-66224572) |
|
2-173, gnl|loxAfr1|scaffold_32517 (2791-2236) |
|
2-173, gnl|mm7|chr19 (4633388-4632834) |
|
2-173, gnl|Mm7|chr19 (4633203-4633374) |
|
2-173, gnl|monDom2|scaffold_107 (2311409-2310852) |
|
2-173, gnl|oryCun1|scaffold_195501 (1026-481) |
|
2-173, gnl|panTro1|chr9 (67473457-67474011) |
|
2-173, gnl|rheMac2|chr14 (7758957-7758404) |
|
2-173, gnl|rn3|chr1 (207498456-207497902) |
|
2-173, gnl|tetNig1|chr7 (4687451-4686920) |
|
2-173, gnl|xenTro1|scaffold_502 (376360-376914) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-173, gnl|bosTau2|chr29 (36809691-36809862) |
|
2-173, gnl|canFam2|chr18 (53681951-53681397) |
|
2-173, gnl|danRer3|chr17 (43643394-43643951) |
|
2-173, gnl|dasNov1|scaffold_16769 (54517-53961) |
|
2-173, gnl|echTel1|scaffold_281684 (15435-14882) |
|
2-173, gnl|fr1|chrUn (4379436-4379971) |
|
2-173, gnl|galGal2|chr3 (2641939-2642492) |
|
2-173, gnl|hg17|chr11 (66224560-66225114) |
|
2-173, gnl|Hg17|chr11 (66224743-66224572) |
|
2-173, gnl|loxAfr1|scaffold_32517 (2791-2236) |
|
2-173, gnl|mm7|chr19 (4633388-4632834) |
|
2-173, gnl|Mm7|chr19 (4633203-4633374) |
|
2-173, gnl|monDom2|scaffold_107 (2311409-2310852) |
|
2-173, gnl|oryCun1|scaffold_195501 (1026-481) |
|
2-173, gnl|panTro1|chr9 (67473457-67474011) |
|
2-173, gnl|rheMac2|chr14 (7758957-7758404) |
|
2-173, gnl|rn3|chr1 (207498456-207497902) |
|
2-173, gnl|tetNig1|chr7 (4687451-4686920) |
|
2-173, gnl|xenTro1|scaffold_502 (376360-376914) |
