Non-Coding RNA Search

Pig1-47B17

Sequence:


               
               GTTTAACACCCAATAAAATGTGACATTTGACATTGCAGCCAAAATCTGTAGTGGCAAGAG
CAGTACACTTTCACTGTTTATGCCAGTTTTTCCATTCATTAACAGTATTGCTTTTGCAAG
TCAACTCTTTCTGTGCCTCAGTTTCATTGTCTATAAATACAATAGGGAATAAGAGCAATA
ACCTTGCCTCGATCACAGAGATGTTGTCAAGCACAGGAGAAAAAAGCAGAAGCTGTATTT
AAAATATTCTAAAATTTTTAAATGCTATGGAAATACATATGTCAATTTATAGGCTCCTAT
AGCATACCCTGGTAGGAGGTAGCTTAGATCTGTGTCGGGCTTTATCCACATCTTCCGTAT
TTCAGAACTAGATGGATATGACAGCAATTCTGGTTTCCATTCTTCACAAATATGTCAGAG
AAGCAAATGTTGAATATTTTACCCAGGCTTGAAGTGAACCTGTCTTGAAATGAACAGAGT
TCAGTGAAAGAAAAACACAGTGGAGGAACCTACTTAGATAAAAAGATCACAGAAGGTTTT
TC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTAACACCCAATAAAATGTGACATTTGACATTGCAGCCAAAATCTGTAGTGGCAAGAG
CAGTACACTTTCACTGTTTATGCCAGTTTTTCCATTCATTAACAGTATTGCTTTTGCAAG
TCAACTCTTTCTGTGCCTCAGTTTCATTGTCTATAAATACAATAGGGAATAAGAGCAATA
ACCTTGCCTCGATCACAGAGATGTTGTCAAGCACAGGAGAAAAAAGCAGAAGCTGTATTT
AAAATATTCTAAAATTTTTAAATGCTATGGAAATACATATGTCAATTTATAGGCTCCTAT
AGCATACCCTGGTAGGAGGTAGCTTAGATCTGTGTCGGGCTTTATCCACATCTTCCGTAT
TTCAGAACTAGATGGATATGACAGCAATTCTGGTTTCCATTCTTCACAAATATGTCAGAG
AAGCAAATGTTGAATATTTTACCCAGGCTTGAAGTGAACCTGTCTTGAAATGAACAGAGT
TCAGTGAAAGAAAAACACAGTGGAGGAACCTACTTAGATAAAAAGATCACAGAAGGTTTT
TC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               424-542, - strand, RNAz p=0.615306

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               424-542, - strand, RNAz p=0.615306

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               86-542, gnl|bosTau2|chr21 (23498218-23498650)
               

               
               86-542, gnl|Mm7|chr12 (42874861-42874495)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-542, gnl|bosTau2|chr21 (23498218-23498650)
               

               
               86-542, gnl|Mm7|chr12 (42874861-42874495)

	86-542, gnl\|bosTau2\|chr21 (23498218-23498650)
	86-542, gnl\|Mm7\|chr12 (42874861-42874495)