Non-Coding RNA Search

Pig1-49K14

Sequence:


               
               GGCTGATGGCCGCATCCTGCAGGTAGGTGCCTTATCTCCACAGCCCCTTGTTCCCAGAAT
CCTGTCCCCATTTTGCTCACCGTTGACCTGTCCCAGGTGGAACTGGCCAGGTCTCCCAAC
CACTTGCTGTATGTGTCCAACTTCTCACTGGGCAGCAATGGGCAGCCTGTGCATCGGGAT
GTCAGTCGACTTGGGGACTACTTGCACTTTGCCTCTGGTGACCAGGTAAGGAGGGCAGGG
GCAAGGCCTGGGGCTGGGCTGTGGGAGCACAGCCTCCACATAGATTCCAGGGAGCACTGA
GACACAGGTCTCGCCACCCTGATTTACAGTGGGACCAGGGAAGGTCTGTGAAGCTTAGTC
CCCTCCTTCAGCCACCCCTGAGCCACCTGTCTGTCCAAGGTCTTCCAGGTACCTATCCGG
GGCCCTGGCTGCCGCCACTTCCTCACCTGTGGGCATTGCCTGCGGGCACAACGTTTCATG
GGCTGTGGATGGTGTGGGAACATGTGTGCCCAACAGAAGGAGTGTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGATGGCCGCATCCTGCAGGTAGGTGCCTTATCTCCACAGCCCCTTGTTCCCAGAAT
CCTGTCCCCATTTTGCTCACCGTTGACCTGTCCCAGGTGGAACTGGCCAGGTCTCCCAAC
CACTTGCTGTATGTGTCCAACTTCTCACTGGGCAGCAATGGGCAGCCTGTGCATCGGGAT
GTCAGTCGACTTGGGGACTACTTGCACTTTGCCTCTGGTGACCAGGTAAGGAGGGCAGGG
GCAAGGCCTGGGGCTGGGCTGTGGGAGCACAGCCTCCACATAGATTCCAGGGAGCACTGA
GACACAGGTCTCGCCACCCTGATTTACAGTGGGACCAGGGAAGGTCTGTGAAGCTTAGTC
CCCTCCTTCAGCCACCCCTGAGCCACCTGTCTGTCCAAGGTCTTCCAGGTACCTATCCGG
GGCCCTGGCTGCCGCCACTTCCTCACCTGTGGGCATTGCCTGCGGGCACAACGTTTCATG
GGCTGTGGATGGTGTGGGAACATGTGTGCCCAACAGAAGGAGTGTCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               267-461, - strand, RNAz p=0.893029

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               267-461, - strand, RNAz p=0.893029

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-528, gnl|bosTau2|chr22 (38216533-38216008)
               

               
               2-528, gnl|Hg17|chr3 (49911532-49910997)
               

               
               2-528, gnl|Mm7|chr9 (107643346-107643864)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-528, gnl|bosTau2|chr22 (38216533-38216008)
               

               
               2-528, gnl|Hg17|chr3 (49911532-49910997)
               

               
               2-528, gnl|Mm7|chr9 (107643346-107643864)

	2-528, gnl\|bosTau2\|chr22 (38216533-38216008)
	2-528, gnl\|Hg17\|chr3 (49911532-49910997)
	2-528, gnl\|Mm7\|chr9 (107643346-107643864)