Non-Coding RNA Search

Pig1-50A24

Sequence:


               
               GGCCGCGGAGTCTTGCTTTCACTGCTGGCCTTGATCGAAACCGTGGTCCGCTTCACCTTT
GGGGGCTTGCAGGCCTTGTGTACAGTACTCTACAGTTGCTATTCTGGCCTGGAGAGCTTA
AAGCTCCTGGGGCATCTGGCCTCTCATGGGGCACTTAGGAGCCGCGAGATCCTGCACCGG
GGCGTCCTCAATATGGTCTCCAGTGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGT
GCCATTACCATGAGCCTGGTGGCCTACGTGATCAACAGCCTGGTCAACATCTGCCTCATT
GGCACTCAGAACCTCTTCTCCCTGGTGCTGGCCCTGTGGGATGCAGTGATGGGGCCTCTG
TGGAGGATGACAGATGTGGTGGCTGCCTTCCTAGCCCACATTTCCAGCAGTGCTGTGGCC
ATGTCCATCCTCCTCTGGACCCCCTGCCAACTAGTACTGGAGCTCCTGGCCTCAGCTGCC
CGCTTCCTGGCCAGCTTTGTGCTTGTCAATCTCACCGGCCTGGCACTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGCGGAGTCTTGCTTTCACTGCTGGCCTTGATCGAAACCGTGGTCCGCTTCACCTTT
GGGGGCTTGCAGGCCTTGTGTACAGTACTCTACAGTTGCTATTCTGGCCTGGAGAGCTTA
AAGCTCCTGGGGCATCTGGCCTCTCATGGGGCACTTAGGAGCCGCGAGATCCTGCACCGG
GGCGTCCTCAATATGGTCTCCAGTGGCCATGCTTTGCTGCGCCAGGCCTGTGACATATGT
GCCATTACCATGAGCCTGGTGGCCTACGTGATCAACAGCCTGGTCAACATCTGCCTCATT
GGCACTCAGAACCTCTTCTCCCTGGTGCTGGCCCTGTGGGATGCAGTGATGGGGCCTCTG
TGGAGGATGACAGATGTGGTGGCTGCCTTCCTAGCCCACATTTCCAGCAGTGCTGTGGCC
ATGTCCATCCTCCTCTGGACCCCCTGCCAACTAGTACTGGAGCTCCTGGCCTCAGCTGCC
CGCTTCCTGGCCAGCTTTGTGCTTGTCAATCTCACCGGCCTGGCACTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               400-529, - strand, RNAz p=0.959818

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               400-529, - strand, RNAz p=0.959818

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-529, gnl|bosTau2|chr15 (14420994-14421522)
               

               
               1-529, gnl|Hg17|chr11 (118711214-118711742)
               

               
               1-529, gnl|Mm7|chr9 (44047123-44046595)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-529, gnl|bosTau2|chr15 (14420994-14421522)
               

               
               1-529, gnl|Hg17|chr11 (118711214-118711742)
               

               
               1-529, gnl|Mm7|chr9 (44047123-44046595)

	1-529, gnl\|bosTau2\|chr15 (14420994-14421522)
	1-529, gnl\|Hg17\|chr11 (118711214-118711742)
	1-529, gnl\|Mm7\|chr9 (44047123-44046595)