Non-Coding RNA Search

Pig1-50C09

Sequence:


               
               TCTTTACCTGTTTCTTGTTTTATATTCATCTGTCCCTTTAAAAATGATTCTTCTACAATT
CATTCCAACCTGATAGTTTCCCACGTTCAAAAACATTCTGAAGGGAGGTTCATCAAAAGT
GATTTATGGGTGACCAAATTTTAATTTAAAACCAGTGCAAAAACATTATGTAGACTATGC
AAAATGGAAATTATCATCAGCTTATTTTGTGTAGGACTACACTAGGCAGACAAAGCGTTT
GGTCTAAAGTGGAAAGCAACTTAAATTCTTCGTGAAGAAATTAGTGTCTGAATTATTTCA
GGTATTTCATTTCCTCAGGGAAAATACAGATGCAAATCAAGTTGGACTCTTGATATGGTT
GGTCCAATGCCAGTGCTGCCATCTTTTTTCATGTAAGGATTATTTTGAAGGCAAAGACTA
AAAGGAGCTTCAAGAGTGGGTGATGTGTTGCTCACAGAAATAATTTGCAGAGTAAGCTCC
TTTGAGGCATTTGCCGAAGATTTCACTGCAGTGCTCTTAACCAGTTCAAACTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTACCTGTTTCTTGTTTTATATTCATCTGTCCCTTTAAAAATGATTCTTCTACAATT
CATTCCAACCTGATAGTTTCCCACGTTCAAAAACATTCTGAAGGGAGGTTCATCAAAAGT
GATTTATGGGTGACCAAATTTTAATTTAAAACCAGTGCAAAAACATTATGTAGACTATGC
AAAATGGAAATTATCATCAGCTTATTTTGTGTAGGACTACACTAGGCAGACAAAGCGTTT
GGTCTAAAGTGGAAAGCAACTTAAATTCTTCGTGAAGAAATTAGTGTCTGAATTATTTCA
GGTATTTCATTTCCTCAGGGAAAATACAGATGCAAATCAAGTTGGACTCTTGATATGGTT
GGTCCAATGCCAGTGCTGCCATCTTTTTTCATGTAAGGATTATTTTGAAGGCAAAGACTA
AAAGGAGCTTCAAGAGTGGGTGATGTGTTGCTCACAGAAATAATTTGCAGAGTAAGCTCC
TTTGAGGCATTTGCCGAAGATTTCACTGCAGTGCTCTTAACCAGTTCAAACTCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               410-528, - strand, RNAz p=0.955893

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               410-528, - strand, RNAz p=0.955893

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-534, gnl|bosTau2|chr14 (14023936-14024466)
               

               
               1-534, gnl|Hg17|chr8 (103384818-103384265)
               

               
               1-534, gnl|Mm7|chr15 (38123539-38122989)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-534, gnl|bosTau2|chr14 (14023936-14024466)
               

               
               1-534, gnl|Hg17|chr8 (103384818-103384265)
               

               
               1-534, gnl|Mm7|chr15 (38123539-38122989)

	1-534, gnl\|bosTau2\|chr14 (14023936-14024466)
	1-534, gnl\|Hg17\|chr8 (103384818-103384265)
	1-534, gnl\|Mm7\|chr15 (38123539-38122989)