Pig1-50H18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGACGCGTGGGCGGACGCGTGGGGGACAACCTGGATTTTATTCAGTGGTTTAAGAAAT TCTATGATGCTAACTATGATGGGAAGGAGTATGATCCCGTAGAAGCACGACAAGGGCAAG ATGCAATTCCTCCTCCTGACCCTGGCGAACAGATCTTCAACCTGCCCAAGAAGTCTCACC ATGCAAACTCCCCTACTGCAGGTGCAGCTAAATCAAGTCCGGCATCTAAACCAGGATCCA CACCTTCTCGTCCCTCATCAGCCAAAAGGGCTTCGTCTAGCAGCTCAGCATCCAAATCTG ATAAAGATTTAGAAACACAAGTCATACAGCTTAATGAACAGGTACATTCGTTAAAACTTG CCCTTGAAGGCGTGGAAAAGGAAAGGGATTTCTACTTTGGAAAGTTGAGAGAGATTGAGC TGCTCTGCCAGGAGCACGGGCAGGAAAACGATGACCTCGTGCAACGACTAATGGAAGTCC TGTATGCTTCGGAAGAACACGAGGGCCACCCGGAGGAGCCGGAAGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGACGCGTGGGCGGACGCGTGGGGGACAACCTGGATTTTATTCAGTGGTTTAAGAAAT TCTATGATGCTAACTATGATGGGAAGGAGTATGATCCCGTAGAAGCACGACAAGGGCAAG ATGCAATTCCTCCTCCTGACCCTGGCGAACAGATCTTCAACCTGCCCAAGAAGTCTCACC ATGCAAACTCCCCTACTGCAGGTGCAGCTAAATCAAGTCCGGCATCTAAACCAGGATCCA CACCTTCTCGTCCCTCATCAGCCAAAAGGGCTTCGTCTAGCAGCTCAGCATCCAAATCTG ATAAAGATTTAGAAACACAAGTCATACAGCTTAATGAACAGGTACATTCGTTAAAACTTG CCCTTGAAGGCGTGGAAAAGGAAAGGGATTTCTACTTTGGAAAGTTGAGAGAGATTGAGC TGCTCTGCCAGGAGCACGGGCAGGAAAACGATGACCTCGTGCAACGACTAATGGAAGTCC TGTATGCTTCGGAAGAACACGAGGGCCACCCGGAGGAGCCGGAAGCAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 339-457, + strand, RNAz p=0.73796 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 339-457, + strand, RNAz p=0.73796 |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 26-203, gnl|bosTau2|chr24 (17915264-17915087) | |
| 26-203, gnl|Hg17|chr18 (30935946-30936123) | |
| 26-203, gnl|Mm7|chr18 (24242639-24242816) | |
| 27-172, gnl|bosTau2|chr11 (55394091-55394236) | |
| 27-172, gnl|canFam2|chr17 (24005165-24005333) | |
| 27-172, gnl|danRer3|chr4 (965387-965553) | |
| 27-172, gnl|dasNov1|scaffold_7242 (13731-13576) | |
| 27-172, gnl|echTel1|scaffold_76960 (988-828) | |
| 27-172, gnl|fr1|chrUn (2274826-2274990) | |
| 27-172, gnl|galGal2|chr20 (9813970-9814135) | |
| 27-172, gnl|hg17|chr2 (27158606-27158774) | |
| 27-172, gnl|Hg17|chr2 (27158654-27158799) | |
| 27-172, gnl|loxAfr1|scaffold_2034 (93619-93451) | |
| 27-172, gnl|mm7|chr5 (29895711-29895879) | |
| 27-172, gnl|Mm7|chr5 (29895759-29895904) | |
| 27-172, gnl|monDom2|scaffold_1 (149283834-149283666) | |
| 27-172, gnl|oryCun1|scaffold_162059 (213-368) | |
| 27-172, gnl|panTro1|chr12 (28081861-28082029) | |
| 27-172, gnl|rheMac2|chr13 (26977294-26977462) | |
| 27-172, gnl|rn3|chr6 (25502090-25501922) | |
| 27-172, gnl|tetNig1|chr14 (1776788-1776623) | |
| 27-172, gnl|xenTro1|scaffold_1289 (96254-96090) | |
| 339-501, gnl|bosTau2|chr24 (17881360-17881198) | |
| 339-501, gnl|canFam2|chr7 (57832595-57832407) | |
| 339-501, gnl|danRer3|chr24 (30459881-30460062) | |
| 339-501, gnl|dasNov1|scaffold_6605 (19614-19427) | |
| 339-501, gnl|echTel1|scaffold_114814 (728-893) | |
| 339-501, gnl|fr1|chrUn (61324304-61324472) | |
| 339-501, gnl|galGal2|chr2 (106833945-106834122) | |
| 339-501, gnl|hg17|chr18 (30965979-30966167) | |
| 339-501, gnl|Hg17|chr18 (30965992-30966153) | |
| 339-501, gnl|loxAfr1|scaffold_8851 (35733-35545) | |
| 339-501, gnl|mm7|chr18 (24268181-24268368) | |
| 339-501, gnl|Mm7|chr18 (24268192-24268354) | |
| 339-501, gnl|monDom2|scaffold_4 (119825504-119825319) | |
| 339-501, gnl|oryCun1|scaffold_205762 (339298-339480) | |
| 339-501, gnl|panTro1|chr17 (26921546-26921734) | |
| 339-501, gnl|rheMac2|chr18 (28110685-28110873) | |
| 339-501, gnl|rn3|chr3 (144050910-144051100) | |
| 339-501, gnl|tetNig1|chr15_random (609781-609967) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 26-203, gnl|bosTau2|chr24 (17915264-17915087) | |
| 26-203, gnl|Hg17|chr18 (30935946-30936123) | |
| 26-203, gnl|Mm7|chr18 (24242639-24242816) | |
| 27-172, gnl|bosTau2|chr11 (55394091-55394236) | |
| 27-172, gnl|canFam2|chr17 (24005165-24005333) | |
| 27-172, gnl|danRer3|chr4 (965387-965553) | |
| 27-172, gnl|dasNov1|scaffold_7242 (13731-13576) | |
| 27-172, gnl|echTel1|scaffold_76960 (988-828) | |
| 27-172, gnl|fr1|chrUn (2274826-2274990) | |
| 27-172, gnl|galGal2|chr20 (9813970-9814135) | |
| 27-172, gnl|hg17|chr2 (27158606-27158774) | |
| 27-172, gnl|Hg17|chr2 (27158654-27158799) | |
| 27-172, gnl|loxAfr1|scaffold_2034 (93619-93451) | |
| 27-172, gnl|mm7|chr5 (29895711-29895879) | |
| 27-172, gnl|Mm7|chr5 (29895759-29895904) | |
| 27-172, gnl|monDom2|scaffold_1 (149283834-149283666) | |
| 27-172, gnl|oryCun1|scaffold_162059 (213-368) | |
| 27-172, gnl|panTro1|chr12 (28081861-28082029) | |
| 27-172, gnl|rheMac2|chr13 (26977294-26977462) | |
| 27-172, gnl|rn3|chr6 (25502090-25501922) | |
| 27-172, gnl|tetNig1|chr14 (1776788-1776623) | |
| 27-172, gnl|xenTro1|scaffold_1289 (96254-96090) | |
| 339-501, gnl|bosTau2|chr24 (17881360-17881198) | |
| 339-501, gnl|canFam2|chr7 (57832595-57832407) | |
| 339-501, gnl|danRer3|chr24 (30459881-30460062) | |
| 339-501, gnl|dasNov1|scaffold_6605 (19614-19427) | |
| 339-501, gnl|echTel1|scaffold_114814 (728-893) | |
| 339-501, gnl|fr1|chrUn (61324304-61324472) | |
| 339-501, gnl|galGal2|chr2 (106833945-106834122) | |
| 339-501, gnl|hg17|chr18 (30965979-30966167) | |
| 339-501, gnl|Hg17|chr18 (30965992-30966153) | |
| 339-501, gnl|loxAfr1|scaffold_8851 (35733-35545) | |
| 339-501, gnl|mm7|chr18 (24268181-24268368) | |
| 339-501, gnl|Mm7|chr18 (24268192-24268354) | |
| 339-501, gnl|monDom2|scaffold_4 (119825504-119825319) | |
| 339-501, gnl|oryCun1|scaffold_205762 (339298-339480) | |
| 339-501, gnl|panTro1|chr17 (26921546-26921734) | |
| 339-501, gnl|rheMac2|chr18 (28110685-28110873) | |
| 339-501, gnl|rn3|chr3 (144050910-144051100) | |
| 339-501, gnl|tetNig1|chr15_random (609781-609967) |