Non-Coding RNA Search

Pig1-51H10

Sequence:


               
               GGGAAGGTGGGCACTAAAGCTCCCTCTCCCACAGGGCCTGGCTTTGGGGGGAATGGTGAA
GTGAGGGCAAAGTGGGGGCCCCTGCCTCCCTCCCCCTTCTGCACGTGTACACAGACTGAG
CTGCAGGGAGGCCCTGCTTTCTCTCCTCTTTCTGCTCTGGGGTCCTTGGCTTGGGAGCCC
AGGGGAGGGGCCGCTTCTGCAGCTGGCTGGCCCCCCGAACTCCCAGCTCAGCCCAGCTGC
TACCGAAGCTTCCAGAAGCTGCAGCTCTGCCCCCTCTTCCCACCCTCTGAACCAGGAAAG
GCTTTTGCTGACCTGGGGGAGGGCGCCTTGTGAGCGAGTGGGCACCCTTAGAAGGACTAG
CACAGACAACCAGACAGATGGGTGGCGGAGCAGATGGACAGAGACACCCACGCACAGGCA
GACGGAGAGAGACGGACAGATGGACCAGAAAACAAGGCAGGTGCGTGTGAACAATTACCA
GCAGTGCCGCAGACGGTGGGAGAGAAGCAGCACAAAACACGATGCAGTCGGAAGAGTCTG
GGCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAGGTGGGCACTAAAGCTCCCTCTCCCACAGGGCCTGGCTTTGGGGGGAATGGTGAA
GTGAGGGCAAAGTGGGGGCCCCTGCCTCCCTCCCCCTTCTGCACGTGTACACAGACTGAG
CTGCAGGGAGGCCCTGCTTTCTCTCCTCTTTCTGCTCTGGGGTCCTTGGCTTGGGAGCCC
AGGGGAGGGGCCGCTTCTGCAGCTGGCTGGCCCCCCGAACTCCCAGCTCAGCCCAGCTGC
TACCGAAGCTTCCAGAAGCTGCAGCTCTGCCCCCTCTTCCCACCCTCTGAACCAGGAAAG
GCTTTTGCTGACCTGGGGGAGGGCGCCTTGTGAGCGAGTGGGCACCCTTAGAAGGACTAG
CACAGACAACCAGACAGATGGGTGGCGGAGCAGATGGACAGAGACACCCACGCACAGGCA
GACGGAGAGAGACGGACAGATGGACCAGAAAACAAGGCAGGTGCGTGTGAACAATTACCA
GCAGTGCCGCAGACGGTGGGAGAGAAGCAGCACAAAACACGATGCAGTCGGAAGAGTCTG
GGCTTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               109-383, - strand, RNAz p=0.987499

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               109-383, - strand, RNAz p=0.987499

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               117-207, + strand, RNAmicro p=0.999961

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               117-207, + strand, RNAmicro p=0.999961

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               109-448, gnl|bosTau2|chr2 (78953365-78953701)
               

               
               109-448, gnl|Hg17|chr1 (27608948-27608612)
               

               
               109-448, gnl|Mm7|chr4 (132395874-132396240)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               109-448, gnl|bosTau2|chr2 (78953365-78953701)
               

               
               109-448, gnl|Hg17|chr1 (27608948-27608612)
               

               
               109-448, gnl|Mm7|chr4 (132395874-132396240)

	109-448, gnl\|bosTau2\|chr2 (78953365-78953701)
	109-448, gnl\|Hg17\|chr1 (27608948-27608612)
	109-448, gnl\|Mm7\|chr4 (132395874-132396240)