Pig1-52P07
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCACCCCAGAGATTGCTTTCTGGGGAAGCAATGCTGGGGTGAAAACAGCACTGCTCGAG GCTCATTCTGAAATGGGGAGCACTGAGATTCTGGAGAAAGAGACCTCAGGAAGCCTCAGT AATGGAACCAGCAGCAATGTAGAAGCAGCCAAAAGGTTGGCCAAGCGCCTTTATCAACTG GACAGGTTCAAAAGATCGGATGTGGCAAAGCACCTGGGCAAGAACAATGAATTTAGCAGA CTGGTTGCAGAAGAATATTTGAAGTTTTTTGATTTTACAGGAATGACACTGGATCAGTCT CTCAGGTATTTTTTTAAAGCATTTTCTCTTGTGGGAGAAACCCAAGAACGAGAGAGAGTT TTAATACACTTCTCCAATAGATATTTTTATTGTAACCCAGATACCATTGCTTCACAAGAT GGAGTCCATTGCCTCACCTGTGCAGTGATGCTTCTGAACACAGACCTCCACGGCCATAAT ATTGGAAAGAAGATGACCTGCCAAGAGTTCATTGCAAACCTCCAAGGGGTAGGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCACCCCAGAGATTGCTTTCTGGGGAAGCAATGCTGGGGTGAAAACAGCACTGCTCGAG GCTCATTCTGAAATGGGGAGCACTGAGATTCTGGAGAAAGAGACCTCAGGAAGCCTCAGT AATGGAACCAGCAGCAATGTAGAAGCAGCCAAAAGGTTGGCCAAGCGCCTTTATCAACTG GACAGGTTCAAAAGATCGGATGTGGCAAAGCACCTGGGCAAGAACAATGAATTTAGCAGA CTGGTTGCAGAAGAATATTTGAAGTTTTTTGATTTTACAGGAATGACACTGGATCAGTCT CTCAGGTATTTTTTTAAAGCATTTTCTCTTGTGGGAGAAACCCAAGAACGAGAGAGAGTT TTAATACACTTCTCCAATAGATATTTTTATTGTAACCCAGATACCATTGCTTCACAAGAT GGAGTCCATTGCCTCACCTGTGCAGTGATGCTTCTGAACACAGACCTCCACGGCCATAAT ATTGGAAAGAAGATGACCTGCCAAGAGTTCATTGCAAACCTCCAAGGGGTAGGTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 28-135, - strand, RNAz p=0.798646 | |
| 298-418, + strand, RNAz p=0.940624 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 28-135, - strand, RNAz p=0.798646 | |
| 298-418, + strand, RNAz p=0.940624 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 28-224, gnl|bosTau2|chr27 (25857565-25857761) | |
| 28-224, gnl|Hg17|chr8 (18706690-18706494) | |
| 28-224, gnl|Mm7|chr8 (66363386-66363178) | |
| 298-418, gnl|bosTau2|chr27 (25859645-25859765) | |
| 298-418, gnl|canFam2|chr16 (24617530-24617651) | |
| 298-418, gnl|danRer3|chr14 (4230935-4230814) | |
| 298-418, gnl|dasNov1|scaffold_7354 (6740-6861) | |
| 298-418, gnl|echTel1|scaffold_283048 (808-687) | |
| 298-418, gnl|fr1|chrUn (139271658-139271754) | |
| 298-418, gnl|hg17|chr8 (18703057-18703178) | |
| 298-418, gnl|Hg17|chr8 (18703180-18703060) | |
| 298-418, gnl|loxAfr1|scaffold_17532 (2462-2341) | |
| 298-418, gnl|mm7|chr8 (66360751-66360872) | |
| 298-418, gnl|Mm7|chr8 (66360874-66360754) | |
| 298-418, gnl|monDom2|scaffold_1 (77450207-77450328) | |
| 298-418, gnl|oryCun1|scaffold_213607 (80233-80354) | |
| 298-418, gnl|panTro1|chr7 (19501855-19501976) | |
| 298-418, gnl|rheMac2|chr8 (18693611-18693732) | |
| 298-418, gnl|rn3|chr16 (23442212-23442091) | |
| 298-418, gnl|tetNig1|chr1 (9603226-9603329) | |
| 298-418, gnl|xenTro1|scaffold_267 (1212179-1212058) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 28-224, gnl|bosTau2|chr27 (25857565-25857761) | |
| 28-224, gnl|Hg17|chr8 (18706690-18706494) | |
| 28-224, gnl|Mm7|chr8 (66363386-66363178) | |
| 298-418, gnl|bosTau2|chr27 (25859645-25859765) | |
| 298-418, gnl|canFam2|chr16 (24617530-24617651) | |
| 298-418, gnl|danRer3|chr14 (4230935-4230814) | |
| 298-418, gnl|dasNov1|scaffold_7354 (6740-6861) | |
| 298-418, gnl|echTel1|scaffold_283048 (808-687) | |
| 298-418, gnl|fr1|chrUn (139271658-139271754) | |
| 298-418, gnl|hg17|chr8 (18703057-18703178) | |
| 298-418, gnl|Hg17|chr8 (18703180-18703060) | |
| 298-418, gnl|loxAfr1|scaffold_17532 (2462-2341) | |
| 298-418, gnl|mm7|chr8 (66360751-66360872) | |
| 298-418, gnl|Mm7|chr8 (66360874-66360754) | |
| 298-418, gnl|monDom2|scaffold_1 (77450207-77450328) | |
| 298-418, gnl|oryCun1|scaffold_213607 (80233-80354) | |
| 298-418, gnl|panTro1|chr7 (19501855-19501976) | |
| 298-418, gnl|rheMac2|chr8 (18693611-18693732) | |
| 298-418, gnl|rn3|chr16 (23442212-23442091) | |
| 298-418, gnl|tetNig1|chr1 (9603226-9603329) | |
| 298-418, gnl|xenTro1|scaffold_267 (1212179-1212058) |