Pig1-56P11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCAGCGCCTCGACCTCTCTGAGAACCTTCTAGATACTCTGCCCCCTGAGATTGGAGGC CTGAGCAGCCTTGCTGAGCTCAATCTGGCCTCCAACCGGCTGCAGAGCCTCCCCGCCTCC CTTGCTCCTTGTCCTGCACAGCAACCTCCTGGCTTCAGTGCCTGCTGGCCTGGCCCGCCT CCCGCTGCTCGCCCGCCTGGACCTGAGGGACAACCAGCTCCGGGACGTGCCACCCGAGCT GCTCGACGCCCCCTTTGTGCGCCTGCAAGGAAATCCTCTGAGTGGGAGCCCCCCCACCCC CCGCAGTCCCCCAGGGACACCCGTGGTCCCCAAAATGCCCAGTCTGTTGCTGAGCTCAGA CCTGGACAGCTTTGCCGTGACCCCCCTGGGCTGCTCGGTGACCCTGACCTGCGGTGTCCG CCTGCGTTTCCCTGCTGGTGCCACCGCGACTCCTGTTACCGTCCGCTATCGGCTGTGGCT GCCGGAGCCACGCCTTGTCCCCCTAGGTCCCCACGACTCTCTGCTCAGTGGCGTCCTGGA GCTGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCAGCGCCTCGACCTCTCTGAGAACCTTCTAGATACTCTGCCCCCTGAGATTGGAGGC CTGAGCAGCCTTGCTGAGCTCAATCTGGCCTCCAACCGGCTGCAGAGCCTCCCCGCCTCC CTTGCTCCTTGTCCTGCACAGCAACCTCCTGGCTTCAGTGCCTGCTGGCCTGGCCCGCCT CCCGCTGCTCGCCCGCCTGGACCTGAGGGACAACCAGCTCCGGGACGTGCCACCCGAGCT GCTCGACGCCCCCTTTGTGCGCCTGCAAGGAAATCCTCTGAGTGGGAGCCCCCCCACCCC CCGCAGTCCCCCAGGGACACCCGTGGTCCCCAAAATGCCCAGTCTGTTGCTGAGCTCAGA CCTGGACAGCTTTGCCGTGACCCCCCTGGGCTGCTCGGTGACCCTGACCTGCGGTGTCCG CCTGCGTTTCCCTGCTGGTGCCACCGCGACTCCTGTTACCGTCCGCTATCGGCTGTGGCT GCCGGAGCCACGCCTTGTCCCCCTAGGTCCCCACGACTCTCTGCTCAGTGGCGTCCTGGA GCTGCAG |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 2-122, - strand, RNAz p=0.919772 | |
| 11-122, - strand, RNAz p=0.882808 | |
| 197-315, - strand, RNAz p=0.61029 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-122, - strand, RNAz p=0.919772 | |
| 11-122, - strand, RNAz p=0.882808 | |
| 197-315, - strand, RNAz p=0.61029 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 12-122, - strand, RNAmicro p=0.999382 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AB209529, - |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 2-122, gnl|bosTau2|chr29 (44805984-44805864) | |
| 2-122, gnl|canFam2|chr18 (48211964-48212134) | |
| 2-122, gnl|danRer3|chrUn (13032474-13032644) | |
| 2-122, gnl|dasNov1|scaffold_54151 (10497-10353) | |
| 2-122, gnl|fr1|chrUn (153284112-153283955) | |
| 2-122, gnl|galGal2|chrUn (152311136-152310984) | |
| 2-122, gnl|hg17|chr11 (793156-793326) | |
| 2-122, gnl|Hg17|chr11 (793296-793176) | |
| 2-122, gnl|loxAfr1|scaffold_85837 (3591-3763) | |
| 2-122, gnl|mm7|chr7 (137859398-137859567) | |
| 2-122, gnl|Mm7|chr7 (137859537-137859417) | |
| 2-122, gnl|monDom2|scaffold_363 (9852-10019) | |
| 2-122, gnl|oryCun1|scaffold_197024 (15481-15623) | |
| 2-122, gnl|panTro1|chr9 (867869-868039) | |
| 2-122, gnl|rheMac2|chr14 (609535-609706) | |
| 2-122, gnl|rn3|chr1 (201783378-201783547) | |
| 2-122, gnl|tetNig1|chr13 (10942424-10942581) | |
| 2-122, gnl|xenTro1|scaffold_251 (1573470-1573637) | |
| 124-315, gnl|bosTau2|chr29 (44805502-44805311) | |
| 124-315, gnl|Hg17|chr11 (792872-792681) | |
| 124-315, gnl|Mm7|chr7 (137859066-137858875) | |
| 368-547, gnl|bosTau2|chr29 (44805001-44804822) | |
| 368-547, gnl|Hg17|chr11 (792398-792219) | |
| 368-547, gnl|Mm7|chr7 (137858640-137858461) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-122, gnl|bosTau2|chr29 (44805984-44805864) | |
| 2-122, gnl|canFam2|chr18 (48211964-48212134) | |
| 2-122, gnl|danRer3|chrUn (13032474-13032644) | |
| 2-122, gnl|dasNov1|scaffold_54151 (10497-10353) | |
| 2-122, gnl|fr1|chrUn (153284112-153283955) | |
| 2-122, gnl|galGal2|chrUn (152311136-152310984) | |
| 2-122, gnl|hg17|chr11 (793156-793326) | |
| 2-122, gnl|Hg17|chr11 (793296-793176) | |
| 2-122, gnl|loxAfr1|scaffold_85837 (3591-3763) | |
| 2-122, gnl|mm7|chr7 (137859398-137859567) | |
| 2-122, gnl|Mm7|chr7 (137859537-137859417) | |
| 2-122, gnl|monDom2|scaffold_363 (9852-10019) | |
| 2-122, gnl|oryCun1|scaffold_197024 (15481-15623) | |
| 2-122, gnl|panTro1|chr9 (867869-868039) | |
| 2-122, gnl|rheMac2|chr14 (609535-609706) | |
| 2-122, gnl|rn3|chr1 (201783378-201783547) | |
| 2-122, gnl|tetNig1|chr13 (10942424-10942581) | |
| 2-122, gnl|xenTro1|scaffold_251 (1573470-1573637) | |
| 124-315, gnl|bosTau2|chr29 (44805502-44805311) | |
| 124-315, gnl|Hg17|chr11 (792872-792681) | |
| 124-315, gnl|Mm7|chr7 (137859066-137858875) | |
| 368-547, gnl|bosTau2|chr29 (44805001-44804822) | |
| 368-547, gnl|Hg17|chr11 (792398-792219) | |
| 368-547, gnl|Mm7|chr7 (137858640-137858461) |