Pig1-57H04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTCTTTTCTCCTTTGGGAGGATGACAAGGCTCAGCCACCCAGGTCCATCTTTCTTTCA AGTCTGGGTTTCCCCTTCACTTCCTGCCCAGACTTGCAGATCTATGCAGTGACACCCATT CCAGATTACGTGGATGTCCTGCAGATGGACAGGGTCCCGGATCGCGTCAAGAGCTTCTAC CGTGTCAACAATGTGAGGAAGTTCCGGTACGACAGGCCTTTTCACAAAGGCCCCAAGGAC AAAGAGAATGAATTCAAGAGCCTGTGGATCGAGCGGACCACACTGACCCTGACCCACAGC TTGCCTGGCATCTCTCGCTGGTTCGAAGTGGAGAGAAGGGAACTGGTGGAGGTGAGCCCT CTGGAGAATGCCATCCAAGTGGTTGAGAATAAGAACCAGGAGCTGCGGGCCCTGATCAGC CAGTATCAACACAAGCAAGTGCATGGCAACATCAACCTTCTCAGCATGTGCCTGAATGGC GTCATTGACGCAGCTGTCAATGGAGGCATTGCACGCTACCAGGAGGCCTTCTTTGATAAA GATTACATCACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTCTTTTCTCCTTTGGGAGGATGACAAGGCTCAGCCACCCAGGTCCATCTTTCTTTCA AGTCTGGGTTTCCCCTTCACTTCCTGCCCAGACTTGCAGATCTATGCAGTGACACCCATT CCAGATTACGTGGATGTCCTGCAGATGGACAGGGTCCCGGATCGCGTCAAGAGCTTCTAC CGTGTCAACAATGTGAGGAAGTTCCGGTACGACAGGCCTTTTCACAAAGGCCCCAAGGAC AAAGAGAATGAATTCAAGAGCCTGTGGATCGAGCGGACCACACTGACCCTGACCCACAGC TTGCCTGGCATCTCTCGCTGGTTCGAAGTGGAGAGAAGGGAACTGGTGGAGGTGAGCCCT CTGGAGAATGCCATCCAAGTGGTTGAGAATAAGAACCAGGAGCTGCGGGCCCTGATCAGC CAGTATCAACACAAGCAAGTGCATGGCAACATCAACCTTCTCAGCATGTGCCTGAATGGC GTCATTGACGCAGCTGTCAATGGAGGCATTGCACGCTACCAGGAGGCCTTCTTTGATAAA GATTACATCACCA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 42-161, - strand, RNAz p=0.726818 | |
| 384-526, + strand, RNAz p=0.817283 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 42-161, - strand, RNAz p=0.726818 | |
| 384-526, + strand, RNAz p=0.817283 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 4-280, gnl|bosTau2|chr22 (37331601-37331875) | |
| 4-280, gnl|Hg17|chr3 (51368474-51368747) | |
| 4-280, gnl|Mm7|chr9 (106642799-106642536) | |
| 345-526, gnl|bosTau2|chr22 (37332821-37333002) | |
| 345-526, gnl|canFam2|chr20 (41215848-41215632) | |
| 345-526, gnl|danRer3|chrUn (109740027-109739821) | |
| 345-526, gnl|dasNov1|scaffold_116589 (1161-1364) | |
| 345-526, gnl|echTel1|scaffold_175284 (328-116) | |
| 345-526, gnl|fr1|chrUn (81329384-81329587) | |
| 345-526, gnl|galGal2|chr12 (1930125-1930340) | |
| 345-526, gnl|hg17|chr3 (51369403-51369619) | |
| 345-526, gnl|Hg17|chr3 (51369432-51369613) | |
| 345-526, gnl|loxAfr1|scaffold_11457 (30149-30365) | |
| 345-526, gnl|mm7|chr9 (106641828-106641614) | |
| 345-526, gnl|Mm7|chr9 (106641799-106641618) | |
| 345-526, gnl|monDom2|scaffold_5 (72339388-72339172) | |
| 345-526, gnl|oryCun1|scaffold_197364 (6905-7116) | |
| 345-526, gnl|panTro1|chr2 (52961869-52962085) | |
| 345-526, gnl|rheMac2|chr2 (85084901-85084685) | |
| 345-526, gnl|rn3|chr8 (112153534-112153320) | |
| 345-526, gnl|tetNig1|chr9 (6214930-6214709) | |
| 345-526, gnl|xenTro1|scaffold_17 (313482-313299) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-280, gnl|bosTau2|chr22 (37331601-37331875) | |
| 4-280, gnl|Hg17|chr3 (51368474-51368747) | |
| 4-280, gnl|Mm7|chr9 (106642799-106642536) | |
| 345-526, gnl|bosTau2|chr22 (37332821-37333002) | |
| 345-526, gnl|canFam2|chr20 (41215848-41215632) | |
| 345-526, gnl|danRer3|chrUn (109740027-109739821) | |
| 345-526, gnl|dasNov1|scaffold_116589 (1161-1364) | |
| 345-526, gnl|echTel1|scaffold_175284 (328-116) | |
| 345-526, gnl|fr1|chrUn (81329384-81329587) | |
| 345-526, gnl|galGal2|chr12 (1930125-1930340) | |
| 345-526, gnl|hg17|chr3 (51369403-51369619) | |
| 345-526, gnl|Hg17|chr3 (51369432-51369613) | |
| 345-526, gnl|loxAfr1|scaffold_11457 (30149-30365) | |
| 345-526, gnl|mm7|chr9 (106641828-106641614) | |
| 345-526, gnl|Mm7|chr9 (106641799-106641618) | |
| 345-526, gnl|monDom2|scaffold_5 (72339388-72339172) | |
| 345-526, gnl|oryCun1|scaffold_197364 (6905-7116) | |
| 345-526, gnl|panTro1|chr2 (52961869-52962085) | |
| 345-526, gnl|rheMac2|chr2 (85084901-85084685) | |
| 345-526, gnl|rn3|chr8 (112153534-112153320) | |
| 345-526, gnl|tetNig1|chr9 (6214930-6214709) | |
| 345-526, gnl|xenTro1|scaffold_17 (313482-313299) |