Non-Coding RNA Search

Pig1-57K08

Sequence:


               
               GAAAGGGCACACATCCGGCTGCACTTCTCCGTGCGGGCATGCTCCAGCCTGGGCGTGGCT
GGCGGCACCTGCCGGGAGACCTTCACGCTTTACTACCGCCAGGCCGAGGAGCCCGATGGC
CCGGACAGCATCTCTGCCTGGCATCTCAAGCGCTGGACCAAGGTGGACACCATCGCGGCA
GATGAGAGCTTCCCCGCCTCCTCGGCGTGGGCGGTGGGCCCCCGAGGGGCCGGACCGCGG
GCAGGGCTCCAGCTGAATGTCAAAGAGCGGAGCTTCGGGCCCTTGACCCAGCGCGGCTTC
TACGTGGCCTTCCAGGACACGGGGGCCTGCCTGGCCCTCGTGGCGGTCAAGCTCTTCTCC
TACGCCTGCCCCTCAGTGCTCCGCGCCTTTGCCTCCTTTCCGGAGACACAGGCCAGTGGG
GCCGGGGGCGCCTCCCTCGTGGCAGCCATGGGCACCTGTGTGGCTCACGCCGAGCCAGAG
GAGGATGGAGGAGGGGGCCAGGCAGGGGGCAGCCCCCCTAGACTGCACTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGGGCACACATCCGGCTGCACTTCTCCGTGCGGGCATGCTCCAGCCTGGGCGTGGCT
GGCGGCACCTGCCGGGAGACCTTCACGCTTTACTACCGCCAGGCCGAGGAGCCCGATGGC
CCGGACAGCATCTCTGCCTGGCATCTCAAGCGCTGGACCAAGGTGGACACCATCGCGGCA
GATGAGAGCTTCCCCGCCTCCTCGGCGTGGGCGGTGGGCCCCCGAGGGGCCGGACCGCGG
GCAGGGCTCCAGCTGAATGTCAAAGAGCGGAGCTTCGGGCCCTTGACCCAGCGCGGCTTC
TACGTGGCCTTCCAGGACACGGGGGCCTGCCTGGCCCTCGTGGCGGTCAAGCTCTTCTCC
TACGCCTGCCCCTCAGTGCTCCGCGCCTTTGCCTCCTTTCCGGAGACACAGGCCAGTGGG
GCCGGGGGCGCCTCCCTCGTGGCAGCCATGGGCACCTGTGTGGCTCACGCCGAGCCAGAG
GAGGATGGAGGAGGGGGCCAGGCAGGGGGCAGCCCCCCTAGACTGCACTGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61830950|ref|XP_596197.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61830950|ref|XP_596197.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               297-531, - strand, RNAz p=0.883646

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               297-531, - strand, RNAz p=0.883646

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-531, gnl|bosTau2|chr4 (60472463-60471937)
               

               
               5-531, gnl|Hg17|chr7 (142078700-142079253)
               

               
               5-531, gnl|Mm7|chr6 (41545288-41545823)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-531, gnl|bosTau2|chr4 (60472463-60471937)
               

               
               5-531, gnl|Hg17|chr7 (142078700-142079253)
               

               
               5-531, gnl|Mm7|chr6 (41545288-41545823)

	5-531, gnl\|bosTau2\|chr4 (60472463-60471937)
	5-531, gnl\|Hg17\|chr7 (142078700-142079253)
	5-531, gnl\|Mm7\|chr6 (41545288-41545823)