Non-Coding RNA Search

Pig1-57M03

Sequence:


               
               GCTGAGAAGGAAAACTCTGCTCAAGGAAGGACGGAAGCCTGCGCTGTCCTCCTGGACCAG
GTACTGGGTCATACTCTCAGGATCCACCCTCCTGTACTACGGAGCCAAGTCCTTGCGGGG
CACAGACAGAAAACACTATAAATCCACACCTGGCAAGAAGGTCAACGTCGTGGGCTGGAT
GGTGCAGCTGCCCGATGACCCCGAGCACCCGGACATCTTCCAGCTGAATAACCCCGACAA
AGGCAATGTTTACAAGTTCCAGACCGGTTCCCGATTTCACGCGATACTGTGGCACAAGCA
TTTGGACGATGCGTGTAAAAGCAACAGGCCTCAGGTACCTGCAAACCTTATGTCATTCGA
GTAAGTCTCTGCGGGACTTCGCGTGACTTCAGAGGCTTCTGGGAGCCCAGCCTGGGACTG
GTGGCCGAGCGCAGGTCCCGGACACAAGGCTGTTGGCGGGGTGCTGGGAGACTCACAGCC
GGACTGGAGGGCACGCGGCTGCGGCCTCACAGTCCAGAGGGCTCCGCCGGTGCGGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGAGAAGGAAAACTCTGCTCAAGGAAGGACGGAAGCCTGCGCTGTCCTCCTGGACCAG
GTACTGGGTCATACTCTCAGGATCCACCCTCCTGTACTACGGAGCCAAGTCCTTGCGGGG
CACAGACAGAAAACACTATAAATCCACACCTGGCAAGAAGGTCAACGTCGTGGGCTGGAT
GGTGCAGCTGCCCGATGACCCCGAGCACCCGGACATCTTCCAGCTGAATAACCCCGACAA
AGGCAATGTTTACAAGTTCCAGACCGGTTCCCGATTTCACGCGATACTGTGGCACAAGCA
TTTGGACGATGCGTGTAAAAGCAACAGGCCTCAGGTACCTGCAAACCTTATGTCATTCGA
GTAAGTCTCTGCGGGACTTCGCGTGACTTCAGAGGCTTCTGGGAGCCCAGCCTGGGACTG
GTGGCCGAGCGCAGGTCCCGGACACAAGGCTGTTGGCGGGGTGCTGGGAGACTCACAGCC
GGACTGGAGGGCACGCGGCTGCGGCCTCACAGTCCAGAGGGCTCCGCCGGTGCGGGGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|57209370|emb|CAI41454.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57209370|emb|CAI41454.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               134-243, gnl|bosTau2|chr11 (77998598-77998489)
               

               
               134-243, gnl|Hg17|chr9 (127054774-127054883)
               

               
               134-243, gnl|Mm7|chr2 (33150463-33150354)
               


               
               333-538, gnl|bosTau2|chr11 (77993335-77993138)
               

               
               333-538, gnl|Hg17|chr9 (127060571-127060776)
               

               
               333-538, gnl|Mm7|chr2 (33145022-33144821)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               134-243, gnl|bosTau2|chr11 (77998598-77998489)
               

               
               134-243, gnl|Hg17|chr9 (127054774-127054883)
               

               
               134-243, gnl|Mm7|chr2 (33150463-33150354)
               


               
               333-538, gnl|bosTau2|chr11 (77993335-77993138)
               

               
               333-538, gnl|Hg17|chr9 (127060571-127060776)
               

               
               333-538, gnl|Mm7|chr2 (33145022-33144821)

	134-243, gnl\|bosTau2\|chr11 (77998598-77998489)
	134-243, gnl\|Hg17\|chr9 (127054774-127054883)
	134-243, gnl\|Mm7\|chr2 (33150463-33150354)

	333-538, gnl\|bosTau2\|chr11 (77993335-77993138)
	333-538, gnl\|Hg17\|chr9 (127060571-127060776)
	333-538, gnl\|Mm7\|chr2 (33145022-33144821)