Non-Coding RNA Search

Pig1-59A08

Sequence:


               
               GAAGAAATCCAGAACCATCCATGGATGCAGGATGTCCTTCTGCCCCAGGAAACTGCTGAG
ATCCATCTCCACAGCCTCTCACCGGGGCCCAGCAAATAGCTTCTCCGGCAGGTTCTCCCC
TCTCTGTCAGATGCTCAAGGGAGGGAAAGTGTCTGTTTCCAGCTTCCCGAGTACCAGTGA
CACTTCTCTCCAAGCGGGACAGTGCTTGATACAGGAACAACATTTACAACTCATTCCAGA
ACCCAGGCCCCTGGAGGCTGCCTCCCAACAGGAGGAAAAGACTCCACTCCAGGCGTCCTA
GGCCTCAGCTCTTCCCATAGATGCTCTCATCAGCGTCCAGCATCGCTGGACTCTGCAAAG
TCCCAGGGGTGGGGGTGGGGGGTGGGAGTGGGTCAGAACCCTGCCTTGGGACTGTTCCCT
TCCCCACGAGTTCTGCTGAATGCCGCCATGGGTTGGGTAGGGGGAAATCTGGTTGGGGTG
GGATAGGACTAGCACCATTTTAAGTCCCTGTCACCTCTTCCAACTCTTCTGAGTGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAAATCCAGAACCATCCATGGATGCAGGATGTCCTTCTGCCCCAGGAAACTGCTGAG
ATCCATCTCCACAGCCTCTCACCGGGGCCCAGCAAATAGCTTCTCCGGCAGGTTCTCCCC
TCTCTGTCAGATGCTCAAGGGAGGGAAAGTGTCTGTTTCCAGCTTCCCGAGTACCAGTGA
CACTTCTCTCCAAGCGGGACAGTGCTTGATACAGGAACAACATTTACAACTCATTCCAGA
ACCCAGGCCCCTGGAGGCTGCCTCCCAACAGGAGGAAAAGACTCCACTCCAGGCGTCCTA
GGCCTCAGCTCTTCCCATAGATGCTCTCATCAGCGTCCAGCATCGCTGGACTCTGCAAAG
TCCCAGGGGTGGGGGTGGGGGGTGGGAGTGGGTCAGAACCCTGCCTTGGGACTGTTCCCT
TCCCCACGAGTTCTGCTGAATGCCGCCATGGGTTGGGTAGGGGGAAATCTGGTTGGGGTG
GGATAGGACTAGCACCATTTTAAGTCCCTGTCACCTCTTCCAACTCTTCTGAGTGCCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               234-344, - strand, RNAz p=0.913096

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               234-344, - strand, RNAz p=0.913096

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-539, gnl|bosTau2|chr16 (16060752-16060198)
               

               
               1-539, gnl|Hg17|chr6 (37249747-37250292)
               

               
               1-539, gnl|Mm7|chr17 (27686597-27687114)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-539, gnl|bosTau2|chr16 (16060752-16060198)
               

               
               1-539, gnl|Hg17|chr6 (37249747-37250292)
               

               
               1-539, gnl|Mm7|chr17 (27686597-27687114)

	1-539, gnl\|bosTau2\|chr16 (16060752-16060198)
	1-539, gnl\|Hg17\|chr6 (37249747-37250292)
	1-539, gnl\|Mm7\|chr17 (27686597-27687114)