Pig1-59E24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGAAACCTCAGTGGGGGTCCTCTGTGGGGTTTGGGGGCACAAGGAAGCCTTGGGGGTG TGGGGGTAAGGCTCTTAGCTAGAGCTTCCTCCCAGGCCTGGGGGCTGCCATTCTCTGCCT GATTCTCCCCACAGACACCCAAAAAGAGGCAGCCCCTTTGGGTGGGGAGGGGAGGACTTC ATCTCAAAACAGGCTGAGGATGGGGGGAGGGGAAAGTGTTTTTCTTCCTTTTTTTTTTTT TTTTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGAAACCTCAGTGGGGGTCCTCTGTGGGGTTTGGGGGCACAAGGAAGCCTTGGGGGTG TGGGGGTAAGGCTCTTAGCTAGAGCTTCCTCCCAGGCCTGGGGGCTGCCATTCTCTGCCT GATTCTCCCCACAGACACCCAAAAAGAGGCAGCCCCTTTGGGTGGGGAGGGGAGGACTTC ATCTCAAAACAGGCTGAGGATGGGGGGAGGGGAAAGTGTTTTTCTTCCTTTTTTTTTTTT TTTTTTTTT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 52-199, - strand, RNAz p=0.778847 | |
| 111-248, - strand, RNAz p=0.987006 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 52-199, - strand, RNAz p=0.778847 | |
| 111-248, - strand, RNAz p=0.987006 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 88-179, + strand, RNAmicro p=0.984622 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 3-248, gnl|bosTau2|chr7 (44730535-44730773) | |
| 3-248, gnl|canFam2|chr4 (58196299-58196710) | |
| 3-248, gnl|canFam2|chr4 (58196592-58196351) | |
| 3-248, gnl|canFam2|chr4 (58196710-58196362) | |
| 3-248, gnl|dasNov1|scaffold_152002 (790-1183) | |
| 3-248, gnl|dasNov1|scaffold_152002 (1052-811) | |
| 3-248, gnl|dasNov1|scaffold_152002 (1183-824) | |
| 3-248, gnl|echTel1|scaffold_263414 (4020-3627) | |
| 3-248, gnl|echTel1|scaffold_263414 (3749-3976) | |
| 3-248, gnl|echTel1|scaffold_263414 (3627-3964) | |
| 3-248, gnl|hg17|chr1 (197802667-197803053) | |
| 3-248, gnl|hg17|chr5 (154175928-154176257) | |
| 3-248, gnl|Hg17|chr5 (154176070-154176304) | |
| 3-248, gnl|hg17|chr6 (26274652-26274900) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18020-18408) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18286-18044) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18408-18056) | |
| 3-248, gnl|mm7|chr11 (58142668-58142312) | |
| 3-248, gnl|mm7|chr11 (58142415-58142621) | |
| 3-248, gnl|mm7|chr11 (58142312-58142607) | |
| 3-248, gnl|Mm7|chr11 (58142445-58142656) | |
| 3-248, gnl|monDom2|scaffold_6 (51500710-51501176) | |
| 3-248, gnl|monDom2|scaffold_6 (51501176-51500735) | |
| 3-248, gnl|oryCun1|scaffold_211112 (20878-21263) | |
| 3-248, gnl|oryCun1|scaffold_211112 (21143-20909) | |
| 3-248, gnl|oryCun1|scaffold_211112 (21263-20919) | |
| 3-248, gnl|panTro1|chr1 (180493522-180493908) | |
| 3-248, gnl|panTro1|chr4_random (16265135-16265464) | |
| 3-248, gnl|panTro1|chr5 (26751202-26751450) | |
| 3-248, gnl|rheMac2|chr1 (169389371-169388996) | |
| 3-248, gnl|rheMac2|chr4 (26158613-26158857) | |
| 3-248, gnl|rheMac2|chr6 (151185319-151185648) | |
| 3-248, gnl|rn3|chr10 (43690918-43690569) | |
| 3-248, gnl|rn3|chr10 (43690675-43690881) | |
| 3-248, gnl|rn3|chr10 (43690569-43690867) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-248, gnl|bosTau2|chr7 (44730535-44730773) | |
| 3-248, gnl|canFam2|chr4 (58196299-58196710) | |
| 3-248, gnl|canFam2|chr4 (58196592-58196351) | |
| 3-248, gnl|canFam2|chr4 (58196710-58196362) | |
| 3-248, gnl|dasNov1|scaffold_152002 (790-1183) | |
| 3-248, gnl|dasNov1|scaffold_152002 (1052-811) | |
| 3-248, gnl|dasNov1|scaffold_152002 (1183-824) | |
| 3-248, gnl|echTel1|scaffold_263414 (4020-3627) | |
| 3-248, gnl|echTel1|scaffold_263414 (3749-3976) | |
| 3-248, gnl|echTel1|scaffold_263414 (3627-3964) | |
| 3-248, gnl|hg17|chr1 (197802667-197803053) | |
| 3-248, gnl|hg17|chr5 (154175928-154176257) | |
| 3-248, gnl|Hg17|chr5 (154176070-154176304) | |
| 3-248, gnl|hg17|chr6 (26274652-26274900) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18020-18408) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18286-18044) | |
| 3-248, gnl|loxAfr1|scaffold_32266 (18408-18056) | |
| 3-248, gnl|mm7|chr11 (58142668-58142312) | |
| 3-248, gnl|mm7|chr11 (58142415-58142621) | |
| 3-248, gnl|mm7|chr11 (58142312-58142607) | |
| 3-248, gnl|Mm7|chr11 (58142445-58142656) | |
| 3-248, gnl|monDom2|scaffold_6 (51500710-51501176) | |
| 3-248, gnl|monDom2|scaffold_6 (51501176-51500735) | |
| 3-248, gnl|oryCun1|scaffold_211112 (20878-21263) | |
| 3-248, gnl|oryCun1|scaffold_211112 (21143-20909) | |
| 3-248, gnl|oryCun1|scaffold_211112 (21263-20919) | |
| 3-248, gnl|panTro1|chr1 (180493522-180493908) | |
| 3-248, gnl|panTro1|chr4_random (16265135-16265464) | |
| 3-248, gnl|panTro1|chr5 (26751202-26751450) | |
| 3-248, gnl|rheMac2|chr1 (169389371-169388996) | |
| 3-248, gnl|rheMac2|chr4 (26158613-26158857) | |
| 3-248, gnl|rheMac2|chr6 (151185319-151185648) | |
| 3-248, gnl|rn3|chr10 (43690918-43690569) | |
| 3-248, gnl|rn3|chr10 (43690675-43690881) | |
| 3-248, gnl|rn3|chr10 (43690569-43690867) |