Non-Coding RNA Search

Pig1-59G18

Sequence:


               
               GATTAAGGGTTGCACTTCTCCCCCTGCTTGCACTAGTGGAGCACGCTGCCCAAAACCCGG
TGGGATTCAAGGTCAGAATTAGGTCAAAGATGAAAGAAGCCAACACAGCCTCTTGTTCTG
CTTACCTGTCCTCTGTCCAACCCCGATCACCAGCCCTGGTGGCCATCACACGATCGGAAG
TCAGCTGGGGAAGAACAGGGATAGAAATAGCAATCAAGGAGCCTTTTTTGGGGTAAGCCA
CATGGCAGGGGCTTTGCAACAGTCTTTCGTGAGTGGCCGAAATCCCCCACTCACTGCAAA
TGTGCTTTTCAAAGATGCAGGATTTTTTAATAAACAGAGGAAATGATAAATTATGTTGAA
ACTCCACTCCAAAGGCATTTGGTTCTTAACAGCCAAATCCTCTGTAGTCTTTAAATAAAC
AAAAACTTATTTGGTGAACAGACGGNGGGGAAAATGAAAGATTTTCTGTACTTGGGTTCC
ACATGTCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTAAGGGTTGCACTTCTCCCCCTGCTTGCACTAGTGGAGCACGCTGCCCAAAACCCGG
TGGGATTCAAGGTCAGAATTAGGTCAAAGATGAAAGAAGCCAACACAGCCTCTTGTTCTG
CTTACCTGTCCTCTGTCCAACCCCGATCACCAGCCCTGGTGGCCATCACACGATCGGAAG
TCAGCTGGGGAAGAACAGGGATAGAAATAGCAATCAAGGAGCCTTTTTTGGGGTAAGCCA
CATGGCAGGGGCTTTGCAACAGTCTTTCGTGAGTGGCCGAAATCCCCCACTCACTGCAAA
TGTGCTTTTCAAAGATGCAGGATTTTTTAATAAACAGAGGAAATGATAAATTATGTTGAA
ACTCCACTCCAAAGGCATTTGGTTCTTAACAGCCAAATCCTCTGTAGTCTTTAAATAAAC
AAAAACTTATTTGGTGAACAGACGGNGGGGAAAATGAAAGATTTTCTGTACTTGGGTTCC
ACATGTCAAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               352-459, + strand, RNAz p=0.973178

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               352-459, + strand, RNAz p=0.973178

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-490, gnl|bosTau2|chr11 (73819246-73818753)
               

               
               4-490, gnl|Hg17|chr9 (122166591-122167059)
               

               
               4-490, gnl|Mm7|chr2 (36198596-36199026)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-490, gnl|bosTau2|chr11 (73819246-73818753)
               

               
               4-490, gnl|Hg17|chr9 (122166591-122167059)
               

               
               4-490, gnl|Mm7|chr2 (36198596-36199026)

	4-490, gnl\|bosTau2\|chr11 (73819246-73818753)
	4-490, gnl\|Hg17\|chr9 (122166591-122167059)
	4-490, gnl\|Mm7\|chr2 (36198596-36199026)