Pig1-59G22
|
GCACTAACCCCGAAGTGAGATGACAACACAGCCTGTCACAGAACAGGCACATTACAGTTC
ATTTTGCATGAGTGAAGTATCATTAGACTTTTACTTGGGTCTCCACATACACTAAGCTCT
TGAGTATTTTTTCCTGTGGTATCTACCTAGGATTTTTTTAAAATTGTTATTCTCTCAAGG
TACTAAAATCTGTGCCAAGATGTTATTTGAATGCTATTTTGGTGTGACCCAAAAATTAAT
TTTATTCACTCCCTAGTTACTTCTGGTGTACCAGTTTCAGCAGTTACCCAAATGTGCTAC
TGATTAAGTGAGTACCAACTAGGACAGTGTTTCCCAACTAATGTGTTTCAGAGAGACCTC
CAAAGCCCTTTGATCTAGACTGGGCTTTCCCCAGACCTTGGCCACTTAATGCAAAGGTGG
GGCTATAATATGTATATATACACACCATTCACTGTTCTGGCAGGTCAGAAGCCTTCCTGA
ATGAGTCCAAAACAACTAAGGTTTGCTTTTGGAGTGCATTATTGACTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCACTAACCCCGAAGTGAGATGACAACACAGCCTGTCACAGAACAGGCACATTACAGTTC
ATTTTGCATGAGTGAAGTATCATTAGACTTTTACTTGGGTCTCCACATACACTAAGCTCT
TGAGTATTTTTTCCTGTGGTATCTACCTAGGATTTTTTTAAAATTGTTATTCTCTCAAGG
TACTAAAATCTGTGCCAAGATGTTATTTGAATGCTATTTTGGTGTGACCCAAAAATTAAT
TTTATTCACTCCCTAGTTACTTCTGGTGTACCAGTTTCAGCAGTTACCCAAATGTGCTAC
TGATTAAGTGAGTACCAACTAGGACAGTGTTTCCCAACTAATGTGTTTCAGAGAGACCTC
CAAAGCCCTTTGATCTAGACTGGGCTTTCCCCAGACCTTGGCCACTTAATGCAAAGGTGG
GGCTATAATATGTATATATACACACCATTCACTGTTCTGGCAGGTCAGAAGCCTTCCTGA
ATGAGTCCAAAACAACTAAGGTTTGCTTTTGGAGTGCATTATTGACTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
6-413, gnl|bosTau2|chr1 (59502667-59502280) |
|
6-413, gnl|canFam2|chr8 (13400914-13401220) |
|
6-413, gnl|dasNov1|scaffold_12218 (41924-42296) |
|
6-413, gnl|echTel1|scaffold_301065 (114537-114841) |
|
6-413, gnl|hg17|chr14 (30637135-30637434) |
|
6-413, gnl|Hg17|chr14 (30637520-30637115) |
|
6-413, gnl|loxAfr1|scaffold_9007 (94746-94455) |
|
6-413, gnl|mm7|chr12 (49753567-49753864) |
|
6-413, gnl|Mm7|chr12 (49753959-49753567) |
|
6-413, gnl|monDom2|scaffold_53 (3708542-3708841) |
|
6-413, gnl|oryCun1|scaffold_214590 (3758-3469) |
|
6-413, gnl|panTro1|chr15 (29783042-29783342) |
|
6-413, gnl|rheMac2|chr7 (94051927-94052226) |
|
6-413, gnl|rn3|chr6 (71840338-71840638) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-413, gnl|bosTau2|chr1 (59502667-59502280) |
|
6-413, gnl|canFam2|chr8 (13400914-13401220) |
|
6-413, gnl|dasNov1|scaffold_12218 (41924-42296) |
|
6-413, gnl|echTel1|scaffold_301065 (114537-114841) |
|
6-413, gnl|hg17|chr14 (30637135-30637434) |
|
6-413, gnl|Hg17|chr14 (30637520-30637115) |
|
6-413, gnl|loxAfr1|scaffold_9007 (94746-94455) |
|
6-413, gnl|mm7|chr12 (49753567-49753864) |
|
6-413, gnl|Mm7|chr12 (49753959-49753567) |
|
6-413, gnl|monDom2|scaffold_53 (3708542-3708841) |
|
6-413, gnl|oryCun1|scaffold_214590 (3758-3469) |
|
6-413, gnl|panTro1|chr15 (29783042-29783342) |
|
6-413, gnl|rheMac2|chr7 (94051927-94052226) |
|
6-413, gnl|rn3|chr6 (71840338-71840638) |
