Pig1-5E06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACATTTAATGGATTGAGTGACATGGTAATAGCAGTAAAACATCACTATCAAGGGCACGAT AAAATTTACTGCAACAACTGTCATGGTGTAAGAAACAAAAGACACGTCATTTTTCCGCCA GTTTATGGTACATGTGGCCCCAGTGGGATCTGGGGCATAACTAGCCCACCCAATGATAGG CATCAAAGCCCAAAAGAGGCCATTGATCCATGCCCCCAGAATCATGCTGATATAAGTGTT GGTGGTCATTCTTCTTCCTGCTTCAGGACGGCAGATGGTCAGATATCGATCCACGGCCAC AACAGTGAGCAACCCAATACTTGCCATTCCAAAAAAGATATTCAATCCGGCATAAATCTG ACATCCTGCATATCCAAACTTCCAACTTCCATGCAGATCTGAAGCTGCAGACATGGGATA GCCAATGCTACTGACCCCTATATCAGTAGCAGCCAAGTTAATGATAATTGCATTTGTGGG TGTCCGAAGTTCCTTGTGCTTAATGAAGATGCCCAAAACTACTATGTTGCTGAGAATACT TATCATACTCTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACATTTAATGGATTGAGTGACATGGTAATAGCAGTAAAACATCACTATCAAGGGCACGAT AAAATTTACTGCAACAACTGTCATGGTGTAAGAAACAAAAGACACGTCATTTTTCCGCCA GTTTATGGTACATGTGGCCCCAGTGGGATCTGGGGCATAACTAGCCCACCCAATGATAGG CATCAAAGCCCAAAAGAGGCCATTGATCCATGCCCCCAGAATCATGCTGATATAAGTGTT GGTGGTCATTCTTCTTCCTGCTTCAGGACGGCAGATGGTCAGATATCGATCCACGGCCAC AACAGTGAGCAACCCAATACTTGCCATTCCAAAAAAGATATTCAATCCGGCATAAATCTG ACATCCTGCATATCCAAACTTCCAACTTCCATGCAGATCTGAAGCTGCAGACATGGGATA GCCAATGCTACTGACCCCTATATCAGTAGCAGCCAAGTTAATGATAATTGCATTTGTGGG TGTCCGAAGTTCCTTGTGCTTAATGAAGATGCCCAAAACTACTATGTTGCTGAGAATACT TATCATACTCTTTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 102-220, - strand, RNAz p=0.734583 | |
| 110-228, - strand, RNAz p=0.912009 | |
| 442-548, - strand, RNAz p=0.789212 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 102-220, - strand, RNAz p=0.734583 | |
| 110-228, - strand, RNAz p=0.912009 | |
| 442-548, - strand, RNAz p=0.789212 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 102-259, gnl|bosTau2|chr2 (58454174-58454017) | |
| 102-259, gnl|canFam2|chr32 (32937317-32937501) | |
| 102-259, gnl|danRer3|chr13 (22446384-22446568) | |
| 102-259, gnl|dasNov1|scaffold_31657 (15832-16015) | |
| 102-259, gnl|echTel1|scaffold_234696 (4421-4237) | |
| 102-259, gnl|galGal2|chr4 (58619282-58619107) | |
| 102-259, gnl|hg17|chr4 (111114742-111114926) | |
| 102-259, gnl|Hg17|chr4 (111114922-111114765) | |
| 102-259, gnl|loxAfr1|scaffold_6805 (71085-70901) | |
| 102-259, gnl|mm7|chr3 (129652142-129651958) | |
| 102-259, gnl|Mm7|chr3 (129651960-129652117) | |
| 102-259, gnl|monDom2|scaffold_9 (84865987-84865799) | |
| 102-259, gnl|oryCun1|scaffold_193405 (88338-88522) | |
| 102-259, gnl|panTro1|chr3 (127614809-127614993) | |
| 102-259, gnl|rheMac2|chr5 (102733969-102734153) | |
| 102-259, gnl|rn3|chr2 (227245859-227245676) | |
| 102-259, gnl|tetNig1|chrUn_random (125603464-125603642) | |
| 102-259, gnl|xenTro1|scaffold_445 (992221-992386) | |
| 358-548, gnl|bosTau2|chr2 (58451635-58451445) | |
| 358-548, gnl|canFam2|chr32 (32934014-32934224) | |
| 358-548, gnl|danRer3|chr13 (22444471-22444680) | |
| 358-548, gnl|dasNov1|scaffold_31657 (12710-12937) | |
| 358-548, gnl|echTel1|scaffold_234696 (8138-7928) | |
| 358-548, gnl|fr1|chrUn (312315247-312315034) | |
| 358-548, gnl|galGal2|chr4 (58621948-58621736) | |
| 358-548, gnl|hg17|chr4 (111111881-111112092) | |
| 358-548, gnl|Hg17|chr4 (111112089-111111899) | |
| 358-548, gnl|loxAfr1|scaffold_6805 (74376-74166) | |
| 358-548, gnl|mm7|chr3 (129655124-129654913) | |
| 358-548, gnl|Mm7|chr3 (129654914-129655104) | |
| 358-548, gnl|monDom2|scaffold_9 (84872449-84872238) | |
| 358-548, gnl|oryCun1|scaffold_193405 (85844-86053) | |
| 358-548, gnl|panTro1|chr3 (127611952-127612163) | |
| 358-548, gnl|rheMac2|chr5 (102731446-102731657) | |
| 358-548, gnl|rn3|chr2 (227248225-227248014) | |
| 358-548, gnl|tetNig1|chrUn_random (125596302-125596517) | |
| 358-548, gnl|xenTro1|scaffold_445 (988090-988305) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-259, gnl|bosTau2|chr2 (58454174-58454017) | |
| 102-259, gnl|canFam2|chr32 (32937317-32937501) | |
| 102-259, gnl|danRer3|chr13 (22446384-22446568) | |
| 102-259, gnl|dasNov1|scaffold_31657 (15832-16015) | |
| 102-259, gnl|echTel1|scaffold_234696 (4421-4237) | |
| 102-259, gnl|galGal2|chr4 (58619282-58619107) | |
| 102-259, gnl|hg17|chr4 (111114742-111114926) | |
| 102-259, gnl|Hg17|chr4 (111114922-111114765) | |
| 102-259, gnl|loxAfr1|scaffold_6805 (71085-70901) | |
| 102-259, gnl|mm7|chr3 (129652142-129651958) | |
| 102-259, gnl|Mm7|chr3 (129651960-129652117) | |
| 102-259, gnl|monDom2|scaffold_9 (84865987-84865799) | |
| 102-259, gnl|oryCun1|scaffold_193405 (88338-88522) | |
| 102-259, gnl|panTro1|chr3 (127614809-127614993) | |
| 102-259, gnl|rheMac2|chr5 (102733969-102734153) | |
| 102-259, gnl|rn3|chr2 (227245859-227245676) | |
| 102-259, gnl|tetNig1|chrUn_random (125603464-125603642) | |
| 102-259, gnl|xenTro1|scaffold_445 (992221-992386) | |
| 358-548, gnl|bosTau2|chr2 (58451635-58451445) | |
| 358-548, gnl|canFam2|chr32 (32934014-32934224) | |
| 358-548, gnl|danRer3|chr13 (22444471-22444680) | |
| 358-548, gnl|dasNov1|scaffold_31657 (12710-12937) | |
| 358-548, gnl|echTel1|scaffold_234696 (8138-7928) | |
| 358-548, gnl|fr1|chrUn (312315247-312315034) | |
| 358-548, gnl|galGal2|chr4 (58621948-58621736) | |
| 358-548, gnl|hg17|chr4 (111111881-111112092) | |
| 358-548, gnl|Hg17|chr4 (111112089-111111899) | |
| 358-548, gnl|loxAfr1|scaffold_6805 (74376-74166) | |
| 358-548, gnl|mm7|chr3 (129655124-129654913) | |
| 358-548, gnl|Mm7|chr3 (129654914-129655104) | |
| 358-548, gnl|monDom2|scaffold_9 (84872449-84872238) | |
| 358-548, gnl|oryCun1|scaffold_193405 (85844-86053) | |
| 358-548, gnl|panTro1|chr3 (127611952-127612163) | |
| 358-548, gnl|rheMac2|chr5 (102731446-102731657) | |
| 358-548, gnl|rn3|chr2 (227248225-227248014) | |
| 358-548, gnl|tetNig1|chrUn_random (125596302-125596517) | |
| 358-548, gnl|xenTro1|scaffold_445 (988090-988305) |